Pre_GI Gene

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Host: NC_008048 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008048:2838769 Sphingopyxis alaskensis RB2256, complete genome

Host Lineage: Sphingopyxis alaskensis; Sphingopyxis; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Isolated from Resurrection Bay in the Gulf of Alaska. It is a model oligotrophic organism and forms a very small cell size. his genus was created from the Sphingomonas genus on the basis of phylogenetic, phenotypic, and chemotaxonomic characteristics. Sphingopyxis alaskensis is one of the most numerically abundant microbes found in oligotrophic marine waters and is an important contributor of biomass.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
283876928418013033TonB-dependent receptorQuickGO ontologyBLASTP
28419612842344384hypothetical proteinBLASTP
28423412842766426hypothetical protein
284285128450042154pyridine nucleotide-disulphide oxidoreductase dimerisation regionQuickGO ontologyBLASTP
28450622845256195hypothetical proteinBLASTP
28452532845861609RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
28458622846071210hypothetical protein
284608628472101125FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
2847706284778277tRNA-MetQuickGO ontology
284788828480021155S ribosomal RNAQuickGO ontologyBLASTP
28481202850903278423S ribosomal RNAQuickGO ontologyBLASTP
2851208285128376tRNA-AlaQuickGO ontologyBLASTP
2851308285138477tRNA-IleQuickGO ontology
28515692853052148416S ribosomal RNAQuickGO ontologyBLASTP
285350628550381533polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
28550232855448426putative signal-transduction protein with CBS domainsQuickGO ontologyBLASTP
28555732855875303hypothetical proteinBLASTP
28558722856264393thioesterase superfamilyQuickGO ontologyBLASTP
285626128578201560hypothetical proteinBLASTP
285783128592551425hypothetical proteinBLASTP
28593322860153822hypothetical proteinBLASTP
28604112861235825modification methylase HemK familyQuickGO ontologyBLASTP
286133728624041068peptide chain release factor 1QuickGO ontologyBLASTP
286257728638721296histidyl-tRNA synthetaseQuickGO ontologyBLASTP
286391428659952082peptidase M61QuickGO ontologyBLASTP
28659922866621630conserved hypothetical protein-putative membrane proteinQuickGO ontologyBLASTP