Pre_GI Gene

Some Help

Host: NC_007492 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:3462929 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34629293463885957Protein of unknown function DUF1527QuickGO ontologyBLASTP
346388234652641383hypothetical proteinBLASTP
34652683465576309hypothetical proteinBLASTP
346558734671311545hypothetical proteinBLASTP
34677043468297594hypothetical proteinBLASTP
34682973469028732hypothetical proteinBLASTP
34694693469807339hypothetical proteinBLASTP
34699353470897963probable DNA primaseQuickGO ontologyBLASTP
347145434731811728hypothetical proteinBLASTP
34732903473502213hypothetical proteinBLASTP
34735193473659141hypothetical proteinBLASTP
347389134749461056Fimbrial proteinQuickGO ontologyBLASTP
347504034778502811Periplasmic Sensor Hybrid Histidine KinaseQuickGO ontologyBLASTP
347783734790241188Putative diguanylate phosphodiesterase EAL domain with Response Regulator Receiver modulationQuickGO ontologyBLASTP
347911234822733162Histidine KinaseQuickGO ontologyBLASTP
34822963482943648Two Component Transcriptional Regulator LuxR familyQuickGO ontologyBLASTP
34830533483640588Fimbrial proteinQuickGO ontologyBLASTP
34837133484462750pili assembly chaperoneQuickGO ontologyBLASTP
348454834870342487Fimbrial biogenesis outer membrane usher proteinQuickGO ontologyBLASTP
34873783487671294hypothetical proteinBLASTP
34880423488377336hypothetical proteinBLASTP
34886903489256567hypothetical proteinBLASTP
348972834907861059hypothetical proteinBLASTP
34909903491976987hypothetical proteinBLASTP
34920313492585555hypothetical protein
349263734938661230hypothetical proteinBLASTP
34938473494887104137kDa nucleoid-associated proteinQuickGO ontologyBLASTP
34954013495769369hypothetical proteinBLASTP
34959963496868873UbiECOQ5 methyltransferaseQuickGO ontologyBLASTP
34969343497779846Alphabeta hydrolase foldQuickGO ontologyBLASTP
34979483498385438Antibiotic biosynthesis monooxygenaseQuickGO ontologyBLASTP
34983823499275894FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
34993823500011630Transcriptional Regulator TetR familyQuickGO ontologyBLASTP
350030035013281029Integrase catalytic regionQuickGO ontologyBLASTP
35017333502629897hypothetical proteinBLASTP
35034353503725291Predicted transcriptional regulators containing the CopGArcMetJ DNA-binding domainQuickGO ontologyBLASTP
35037283504084357Plasmid stabilization systemQuickGO ontologyBLASTP
35043703504630261hypothetical protein
350496235062781317Phage integraseQuickGO ontologyBLASTP
3506452350653887tRNA-LeuQuickGO ontologyBLASTP
3506734350680774tRNA-CysQuickGO ontologyBLASTP
3506854350692976tRNA-GlyQuickGO ontology
35069903507550561CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseQuickGO ontologyBLASTP
350758335094061824excinuclease ABC subunit CQuickGO ontologyBLASTP