Pre_GI: BLASTP Hits

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Query: NC_007492:3462929:3498382 Pseudomonas fluorescens PfO-1, complete genome

Start: 3498382, End: 3499275, Length: 894

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016514:1183356:119863611986361199604969Enterobacter cloacae EcWSU1 chromosome, complete genomethioredoxin reductase2e-120432
NC_014117:2608000:262710326271032627996894Burkholderia sp. CCGE1002 chromosome chromosome 1, completeFAD-dependent pyridine nucleotide-disulfide oxidoreductase4e-120431
NC_010508:1206498:122228412222841223177894Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceFAD-dependent pyridine nucleotide-disulphide oxidoreductase2e-118425
NC_008463:4133700:4152844415284441541241281Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative pyridine nucleotide-disulphide oxidoreductase2e-117422
NC_014500:3519722:353134135313413532033693Dickeya dadantii 3937 chromosome, complete genomeThioredoxin reductase9e-103373
NC_015138:2110149:212213121221312123033903Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeFAD-dependent pyridine nucleotide-disulfide oxidoreductase8e-49194
NC_008752:3684739:368743636874363688359924Acidovorax avenae subsp. citrulli AAC00-1, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase2e-48192
NC_010995:4460413:447697944769794477896918Cellvibrio japonicus Ueda107, complete genomeputative pyridine nucleotide-disulphide oxidoreductase2e-46186
NC_014217:1352777:136752513675251368418894Starkeya novella DSM 506 chromosome, complete genomeFAD dependent oxidoreductase7e-42171
NC_008687:302450:303759303759304643885Paracoccus denitrificans PD1222 chromosome 2, complete sequenceFAD-dependent pyridine nucleotide-disulphide oxidoreductase9e-42170
NC_008686:1383891:139066513906651391582918Paracoccus denitrificans PD1222 chromosome 1, complete sequenceFAD-dependent pyridine nucleotide-disulphide oxidoreductase9e-42170
NC_014323:3976351:401282940128294013725897Herbaspirillum seropedicae SmR1 chromosome, complete genomethioredoxin reductase2e-41169
NC_007651:2639553:265752726575272658501975Burkholderia thailandensis E264 chromosome I, complete sequencepyridine nucleotide-disulphide oxidoreductase, class II1e-38160
NC_014815:3790050:379197337919733792929957Micromonospora sp. L5 chromosome, complete genomefad-dependent pyridine nucleotide-disulfide oxidoreductase5e-34145
NC_016940:822892:826465826465827370906Saprospira grandis str. Lewin chromosome, complete genomealkyl hydroperoxide reductase F52a subunit2e-32140
NC_009848:720510:743493743493744407915Bacillus pumilus SAFR-032, complete genomethioredoxin-disulfide reductase3e-32139
NC_014550:2013422:201342220134222014339918Arthrobacter arilaitensis Re117, complete genomeputative oxidoreductase9e-32137
NC_015434:3507059:3522676352267635242561581Verrucosispora maris AB-18-032 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-30133
NC_014655:851381:8531298531298541301002Leadbetterella byssophila DSM 17132 chromosome, complete genomefad-dependent pyridine nucleotide-disulfide oxidoreductase2e-30132
NC_013235:464049:466171466171467106936Nakamurella multipartita DSM 44233, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase5e-30131
NC_013521:345308:3723103723103733621053Sanguibacter keddieii DSM 10542, complete genomethioredoxin reductase9e-30130
NC_014623:5661108:567490556749055675855951Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepyridine nucleotide-disulfide oxidoreductase domain-containing protein8e-29127
NC_009380:3903392:3906311390631139073301020Salinispora tropica CNB-440 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-25116
NC_015167:1055145:1055145105514510561461002Cellulophaga lytica DSM 7489 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase5e-25115
NC_009953:2388605:239217623921762393096921Salinispora arenicola CNS-205 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase4e-24112
NC_006087:1334500:135987113598711360812942Leifsonia xyli subsp. xyli str. CTCB07, complete genomepyridine nucleotide-disulfide oxidoreductase6e-1478.2
NC_009480:1261961:126927212692721270222951Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative thioredoxin reductase6e-1375.1
NC_010511:4696868:471419647141964715188993Methylobacterium sp. 4-46 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-1170.5
NC_007164:2446879:2451635245163524526691035Corynebacterium jeikeium K411, complete genomehypothetical protein8e-1064.7
NC_011886:4376261:438268943826894383645957Arthrobacter chlorophenolicus A6, complete genomethioredoxin reductase4e-0962.4
NC_015145:4232283:423883342388334239789957Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomethioredoxin-disulfide reductase7e-0961.6
NC_019897:1224798:1227649122764912291781530Thermobacillus composti KWC4 chromosome, complete genomealkyl hydroperoxide reductase1e-0860.8
NC_016627:689406:694965694965695861897Clostridium clariflavum DSM 19732 chromosome, complete genomethioredoxin reductase2e-0757
NC_008573:195317:2006692006692023241656Shewanella sp. ANA-3 plasmid 1, complete sequencemercuric reductase3e-0755.8
NC_014377:112992:146916146916147836921Thermosediminibacter oceani DSM 16646 chromosome, complete genomethioredoxin reductase (NADPH)1e-0654.3
NC_008346:1499963:150035315003531501216864Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeThioredoxin-disulfide reductase3e-0653.1
NC_009454:1462930:147220014722001473120921Pelotomaculum thermopropionicum SI, complete genomethioredoxin reductase3e-0652.8
NC_020409:1407857:1446198144619814478861689Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFAD-dependent pyridine nucleotide-disulphide oxidoreductase5e-0652