Pre_GI Gene

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Host: NC_007492 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:3384077 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
33840773384757681Molybdate ABC transporter permease proteinQuickGO ontologyBLASTP
338476133858401080Molybdate ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
338591433869511038DNA topoisomerase type I putativeQuickGO ontologyBLASTP
338709533887201626ABC transporter-likeQuickGO ontologyBLASTP
33887923389022231hypothetical protein
33891433389373231hypothetical proteinBLASTP
33894083389701294hypothetical protein
33899323390210279hypothetical protein
33911043391616513hypothetical protein
33916333391764132ISPsy6 transposaseQuickGO ontologyBLASTP
339179533929941200TonB-dependent receptorQuickGO ontologyBLASTP
33931483393564417ester cyclase-likeQuickGO ontologyBLASTP
33936053394372768Beta-lactamase-likeQuickGO ontologyBLASTP
33944403395021582Transcriptional Regulator TetR familyQuickGO ontologyBLASTP
33951453395924780Histidinol-phosphate phosphatase putative inositol monophosphataseQuickGO ontologyBLASTP
33959353396390456CcmECycJ proteinQuickGO ontologyBLASTP
33963873396563177Heme exporter protein DQuickGO ontologyBLASTP
33965603397369810Cytochrome c-type biogenesis protein CcmCQuickGO ontologyBLASTP
339738333985821200Benzoate membrane transport proteinQuickGO ontologyBLASTP
33986673399593927Intradiol ring-cleavage dioxygenaseQuickGO ontologyBLASTP
33996473399937291Muconolactone delta-isomeraseQuickGO ontologyBLASTP
339996434010851122Mandelate racemasemuconate lactonizing enzymeQuickGO ontologyBLASTP
340115034024901341hypothetical proteinBLASTP
34025713403332762cis-diol dehydrogenaseQuickGO ontologyBLASTP
340336534043781014benzoate 12-dioxygenase ferredoxin reductase subunitQuickGO ontologyBLASTP
34044443404929486Aromatic-ring-hydroxylating dioxygenase beta subunitQuickGO ontologyBLASTP
340492634062841359ring hydroxylating dioxygenase alpha subunitQuickGO ontologyBLASTP
34064333407407975Transcriptional Regulator AraC familyQuickGO ontologyBLASTP
340754334096812139chemotaxis sensory transducerQuickGO ontologyBLASTP
34097743410442669hypothetical proteinBLASTP
341044234115301089quinohemoprotein amine dehydrogenase subunit betaQuickGO ontology
34115363411862327hypothetical proteinBLASTP
341185934132921434Radical SAMQuickGO ontologyBLASTP
341330034148501551quinohemoprotein amine dehydrogenase 60 kDa subunitQuickGO ontologyBLASTP
341529434171741881Possible Transcriptional Regulator Fis familyQuickGO ontologyBLASTP