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Query: NC_007492:3384077 Pseudomonas fluorescens PfO-1, complete genome

Start: 3384077, End: 3417174, Length: 33098

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020209:1847895*1847895187267824784Pseudomonas poae RE*1-1-14, complete genome1e-117432BLASTN svgBLASTP svg
NC_004578:40613724061372409399732626Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-112414BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome9e-106392BLASTN svgBLASTP svg
NC_004129:44342594434259445862724369Pseudomonas fluorescens Pf-5, complete genome2e-45192BLASTN svgBLASTP svg
NC_004578:31934903193490323511841629Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-42180BLASTN svgBLASTP svg
NC_004578:1719849*1719849174221722369Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-19105BLASTN svgBLASTP svg
NC_004578:38498353849835387260722773Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-19105BLASTN svgBLASTP svg
NC_004578:4204235*4204235422545421220Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-19105BLASTN svgBLASTP svg
NC_015572:22623742262374228718524812Methylomonas methanica MC09 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010512:110932*11093213790426973Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence4e-1281.8BLASTN svgBLASTP svg
NC_007005:98488*9848813693138444Pseudomonas syringae pv. syringae B728a, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011769:2294387*2294387231565121265Desulfovibrio vulgaris str. 'Miyazaki F', complete genome7e-1177.8BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011901:13983761398376142787629501Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-0869.9BLASTN svgBLASTP svg
NC_011002:56465456465458535320700Burkholderia cenocepacia J2315 chromosome 3, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_008027:29090002909000292988020881Pseudomonas entomophila L48, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_002939:80579480579482823022437Geobacter sulfurreducens PCA, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015572:25419682541968256409922132Methylomonas methanica MC09 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009092:179226*17922620808728862Shewanella loihica PV-4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015410:2505168*2505168253404528878Pseudomonas mendocina NK-01 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013093:31578973157897318209324197Actinosynnema mirum DSM 43827, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_006177:10604281060428108247522048Symbiobacterium thermophilum IAM 14863, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_004578:32416183241618326508823471Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015434:60201786020178604719227015Verrucosispora maris AB-18-032 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008740:3602367*3602367362072718361Marinobacter aquaeolei VT8, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_002696:2829002*2829002285565626655Caulobacter crescentus CB15, complete genome4e-0661.9BLASTN svgBLASTP svg