Pre_GI Gene

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Host: NC_007492 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:2771021 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
277102127725441524hypothetical proteinBLASTP
27727292773028300hypothetical protein
27731942774102909Alphabeta hydrolase foldQuickGO ontologyBLASTP
27742772775020744hypothetical proteinBLASTP
27754892775746258hypothetical proteinBLASTP
277579227767961005Transcriptional Regulator LysR familyQuickGO ontologyBLASTP
2776800277689293probable dehydrogenaseQuickGO ontology
27771482777780633Glutathione S-transferase-likeQuickGO ontologyBLASTP
27777952778253459hypothetical protein
27783682778889522hypothetical proteinBLASTP
27790402779399360hypothetical proteinBLASTP
27797562780112357hypothetical proteinBLASTP
27803352780553219hypothetical protein
278084627833952550hypothetical proteinBLASTP
27835672784469903hypothetical proteinBLASTP
27845492784803255hypothetical protein
27850122785779768Phosphonate uptake transporterQuickGO ontologyBLASTP
27857762786603828Phosphonate uptake transporterQuickGO ontologyBLASTP
27865972787394798ABC transporter-likeQuickGO ontologyBLASTP
27873912788242852Phosphonate-binding periplasmic proteinQuickGO ontologyBLASTP
27883522789191840ThiJPfpIQuickGO ontologyBLASTP
278920627902191014Transcriptional Regulator LysR familyQuickGO ontologyBLASTP
27902262791218993Zinc-containing alcohol dehydrogenase superfamilyQuickGO ontologyBLASTP
27913352792231897Transcriptional Regulator LysR familyQuickGO ontologyBLASTP
27923962793145750Short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
27931472793818672Paraquat-inducible protein AQuickGO ontologyBLASTP
27938152794411597Paraquat-inducible protein AQuickGO ontologyBLASTP
27945642795178615Glutathione S-transferase-likeQuickGO ontologyBLASTP
27952872796189903Transcriptional Regulator LysR familyQuickGO ontologyBLASTP
27963132796738426Protein of unknown function DUF861QuickGO ontologyBLASTP
279680427979191116NADHflavin oxidoreductaseNADH oxidaseQuickGO ontologyBLASTP
279807028003072238Twin-arginine translocation pathway signalQuickGO ontologyBLASTP
28003042800777474FerredoxinQuickGO ontologyBLASTP
280077428020481275Cytochrome c class IQuickGO ontologyBLASTP