Pre_GI Gene

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Host: NC_007348 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007348:2115152 Ralstonia eutropha JMP134 chromosome 2, complete sequence

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
211515221167351584putative integraserecombinase proteinQuickGO ontologyBLASTP
211724221204243183PASQuickGO ontologyBLASTP
212147521227431269Polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
212273621239681233hypothetical proteinBLASTP
21239612124905945Glycosyl transferase family 2QuickGO ontologyBLASTP
212498721264561470hypothetical protein
212676721279841218Benzoate membrane transport proteinQuickGO ontologyBLASTP
21280042128363360hypothetical protein
21288662129858993regulatory protein LuxRQuickGO ontologyBLASTP
21299882130575588hypothetical protein
21306712130949279hypothetical protein
21315162132499984hypothetical proteinBLASTP
213262021345661947hypothetical proteinBLASTP
21349182135640723Cyclic nucleotide-bindingQuickGO ontologyBLASTP
213572921381312403Protein-tyrosine kinaseQuickGO ontologyBLASTP
21384042138655252acyl carrier proteinQuickGO ontology
213865221398601209putative acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
21398712140869999hypothetical proteinBLASTP
214089921434602562Glycoside hydrolase family 2 immunoglobulin-like beta-sandwichQuickGO ontologyBLASTP
214353121445651035hypothetical proteinBLASTP
21447382145355618Undecaprenyl-phosphate galactosephosphotransferaseQuickGO ontologyBLASTP
21454152146083669probable transmembrane proteinQuickGO ontologyBLASTP
21461282146796669transferase hexapeptide repeatQuickGO ontologyBLASTP
214690121491442244Exopolysaccharide transport proteinQuickGO ontologyBLASTP
21491192149607489Low molecular weight phosphotyrosine protein phosphataseQuickGO ontologyBLASTP
214962221507971176Polysaccharide export proteinQuickGO ontologyBLASTP
215123521522931059Glycosyl transferase group 1QuickGO ontologyBLASTP
215244021535581119Glycosyl transferase group 1QuickGO ontologyBLASTP
215354621555762031Asparagine synthase glutamine-hydrolyzingQuickGO ontologyBLASTP
215560721567401134NAD-dependent epimerasedehydratase3-beta hydroxysteroid dehydrogenaseisomerasedTDP-4-dehydrorhamnose reductaseNucleotide sugar epimeraseQuickGO ontologyBLASTP
215672121579981278UDP-glucoseGDP-mannose dehydrogenaseQuickGO ontologyBLASTP
215824621602401995NAD-dependent epimerasedehydrataseShort-chain dehydrogenasereductase SDR3-beta hydroxysteroid dehydrogenaseisomerasePolysaccharide biosynthesis QuickGO ontologyBLASTP