Pre_GI Gene

Some Help

Host: NC_007086 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007086:1988000 Xanthomonas campestris pv. campestris str. 8004, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: The original was isolated from an inflected cauliflower in Sussex, United Kingdom, in 1958. Strain 8004 is a spontaneous rifampicin resistant strain. Causes black rot disease in crucifers. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1988072198826919850S ribosomal protein L35QuickGO ontologyBLASTP
1988280198863936050S ribosomal protein L20QuickGO ontologyBLASTP
198893919899491011phenylalanyl-tRNA synthetase alpha subunitQuickGO ontologyBLASTP
199007919924542376phenylalanyl-tRNA synthetase beta subunitQuickGO ontologyBLASTP
19924751992774300integration host factor alpha subunitQuickGO ontologyBLASTP
19927551993111357hypothetical proteinBLASTP
1993172199324877tRNA-ProQuickGO ontologyBLASTP
19937751994416642GumB proteinQuickGO ontologyBLASTP
199448819958371350GumC proteinQuickGO ontologyBLASTP
199608019975341455GumD proteinQuickGO ontologyBLASTP
199761719989151299GumE proteinQuickGO ontologyBLASTP
199891220000061095GumF proteinQuickGO ontologyBLASTP
200000320010731071GumG proteinQuickGO ontologyBLASTP
200114120022831143GumH proteinQuickGO ontologyBLASTP
200228020033291050GumI proteinQuickGO ontologyBLASTP
200332620048251500GumJ proteinQuickGO ontologyBLASTP
200489020060921203GumK proteinQuickGO ontologyBLASTP
20061332006927795GumL proteinQuickGO ontologyBLASTP
20069352007726792GumM proteinQuickGO ontologyBLASTP
20077612008258498hypothetical proteinBLASTP
200831220093401029GumN proteinQuickGO ontology
20097092010707999GumOQuickGO ontologyBLASTP
20107072011555849GumP proteinQuickGO ontologyBLASTP
20115522012511960NADPH steroid dehydrogenaseQuickGO ontologyBLASTP
201250220136501149hypothetical proteinBLASTP
20136402014242603hypothetical proteinBLASTP
201422720154831257glycosyltransferaseQuickGO ontologyBLASTP