Pre_GI Gene

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Host: NC_007005 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007005:2686551 Pseudomonas syringae pv. syringae B728a, complete genome

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
268655126884401890Peptidoglycan glycosyltransferaseQuickGO ontologyBLASTP
268851026903151806pyruvate dehydrogenaseQuickGO ontologyBLASTP
269068626926471962Histidine kinase HAMP regionBacterial chemotaxis sensory transducerQuickGO ontologyBLASTP
26928362693231396general secretion pathway protein I putativeQuickGO ontology
26932282693752525
26937532693977225
26941242694453330BLASTP
269528126968071527YD repeatQuickGO ontologyBLASTP
269681326983151503YD repeatQuickGO ontologyBLASTP
269834227010832742YD repeatQuickGO ontologyBLASTP
27011162701490375hypothetical protein
27024012702787387hypothetical protein
27030072703525519hypothetical proteinBLASTP
27035432704076534lipoprotein putativeQuickGO ontologyBLASTP
27041162705114999molybdenum cofactor biosynthesis protein AQuickGO ontologyBLASTP
270537927067251347sodiumhydrogen exchanger family proteinQuickGO ontologyBLASTP
270687527079271053extracellular solute-binding protein family 1QuickGO ontologyBLASTP
270792427091081185FAD dependent oxidoreductaseQuickGO ontologyBLASTP
270910527104961392FAD-dependent pyridine nucleotide-disulphide oxidoreductaseBFD-like 2Fe-2S-binding regionQuickGO ontologyBLASTP
27104932710783291hypothetical proteinBLASTP
27108002711594795Binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
27115982712470873Binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
271246727134951029ABC transporterQuickGO ontologyBLASTP
27137372714576840regulatory proteins IclRQuickGO ontologyBLASTP
27146222715584963hypothetical proteinBLASTP
27156502716354705Protein of unknown function DUF1275QuickGO ontologyBLASTP
27164052716632228hypothetical proteinBLASTP
27167622717136375Peptidylprolyl isomerase FKBP-typeQuickGO ontologyBLASTP
27172562717537282hypothetical proteinBLASTP
271818227197501569CBSTransporter-associated regionIntegral membrane protein TerCQuickGO ontologyBLASTP
27198212720396576GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
27204532720707255BLASTP
272114327226931551ea59 proteinQuickGO ontologyBLASTP
27226902723565876hypothetical proteinBLASTP
27238372724484648hypothetical protein
27246252725374750hypothetical protein
27258262726128303hypothetical proteinBLASTP
27265402726998459hypothetical proteinBLASTP
27270772727658582tRNA synthetase class-II G H P and SQuickGO ontologyBLASTP
27279482728475528GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
272859127298171227similar to Uncharacterized protein conserved in bacteriaQuickGO ontologyBLASTP
27299002730739840Taurine catabolism dioxygenase TauDTfdAQuickGO ontologyBLASTP
27311092731615507GAFQuickGO ontologyBLASTP
273188227337411860Histidine kinase HAMP regionBacterial chemotaxis sensory transducerQuickGO ontologyBLASTP
27338232734728906regulatory protein LysRLysR substrate-bindingQuickGO ontologyBLASTP
273483227360341203acetylornithine aminotransferaseQuickGO ontologyBLASTP
27361592736704546hypothetical proteinBLASTP
27367582737198441CBSQuickGO ontologyBLASTP
273742227397852364DNA polymerase IIQuickGO ontologyBLASTP
27397822740627846Silent information regulator protein Sir2QuickGO ontologyBLASTP