Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:2175361 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
217429721753641068imidazole glycerol-phosphate dehydratasehistidinol phosphataseQuickGO ontologyBLASTP
21753612175954594imidazole glycerol phosphate synthase subunit HisHQuickGO ontologyBLASTP
217595421766917381-5-phosphoribosyl-5-5- phosphoribosylaminomethylideneamino imidazole-4-carboxamide isomeraseQuickGO ontologyBLASTP
21766732177449777imidazole glycerol phosphate synthase subunit HisFQuickGO ontologyBLASTP
21774432178054612bifunctional phosphoribosyl-AMP cyclohydrolasephosphoribosyl-ATP pyrophosphatase proteinQuickGO ontologyBLASTP
217813521791721038regulator of length of O-antigen component of lipopolysaccharide chainsQuickGO ontologyBLASTP
217926121804271167UDP-glucoseGDP-mannose dehydrogenaseQuickGO ontologyBLASTP
2180664218207014076-phosphogluconate dehydrogenaseQuickGO ontologyBLASTP
218220721837331527putative 12 transmembrane segment proteinQuickGO ontologyBLASTP
218401921853891371phosphomannomutase in colanic acid gene clusterQuickGO ontologyBLASTP
218540421868221419phosphomannomutase in colanic acid gene clusterQuickGO ontologyBLASTP
218681921880511233hypothetical proteinBLASTP
218800521890121008hypothetical proteinBLASTP
218899621899971002hypothetical proteinBLASTP
218999721910761080O-antigen polymeraseQuickGO ontologyBLASTP
219146121924831023putative glucose-1-phosphate uridylyltransferase UDP-glucose pyrophosphorylase non-catalytic subunitQuickGO ontologyBLASTP
219253221939351404putative colanic acid biosynthesis proteinQuickGO ontologyBLASTP
219394621951661221putative glycosyl transferase in colanic acid gene clusterQuickGO ontologyBLASTP
219516321964431281putative galactokinase in colanic acid gene clusterQuickGO ontologyBLASTP
219646521979431479putative export protein in colanic acid gene clusterQuickGO ontologyBLASTP
219804521994391395putative UDP-glucose lipid carrier transferaseglucose-1-phosphate transferase in colanic acid gene clusterQuickGO ontologyBLASTP
219949322008631371phosphomannomutase in colanic acid gene clusterQuickGO ontologyBLASTP
220097422024161443mannose-1-phosphate in colanic acid gene clusterQuickGO ontologyBLASTP
220241322036361224putative glycosyl transferase in colanic acid biosynthesisQuickGO ontologyBLASTP
22036332204106474putative glycosyl transferase in colanic acid biosynthesisQuickGO ontologyBLASTP