Pre_GI Gene

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Host: NC_006814 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006814:403723 Lactobacillus acidophilus NCFM, complete genome

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism is a normal inhabitant of the human intestinal tract. This strain was isolated from a human in 1970. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
403723404105383hypothetical protein
4041584052741117xaa-pro dipeptidaseQuickGO ontology
4053934064101018catabolite control protein AQuickGO ontology
4064454078251381putative glycerophosphoryl diester phosphodiesteraseQuickGO ontology
407900408231332hypothetical protein
4082344096291396putative UDP-sugar hydrolaseQuickGO ontology
409562410230669hypothetical proteinBLASTP
410230411006777n-acetylglucosamine catabolic proteinQuickGO ontologyBLASTP
411003411611609hypothetical proteinBLASTP
411621412282662hypothetical protein
412281413165885thioredoxin reductaseQuickGO ontologyBLASTP
413779415350157216S ribosomal RNAQuickGO ontologyBLASTP
41547141554575tRNA-IleQuickGO ontology
41560241567473tRNA-AlaQuickGO ontologyBLASTP
415728418779305223S ribosomal RNAQuickGO ontologyBLASTP
4187704188861175S ribosomal RNAQuickGO ontologyBLASTP
41889041896273tRNA-ValQuickGO ontologyBLASTP
41896541903773tRNA-LysQuickGO ontologyBLASTP
41905041913182tRNA-LeuQuickGO ontologyBLASTP
41915641922873tRNA-ThrQuickGO ontologyBLASTP
41923941931072tRNA-GlyQuickGO ontology
41932341940886tRNA-LeuQuickGO ontologyBLASTP
41941741949074tRNA-ArgQuickGO ontologyBLASTP
41949641956974tRNA-ProQuickGO ontology
41960041967374tRNA-MetQuickGO ontology
41968641975974tRNA-MetQuickGO ontologyBLASTP
41977641984974tRNA-MetQuickGO ontology
41985341992674tRNA-AspQuickGO ontologyBLASTP
41993342000573tRNA-PheQuickGO ontologyBLASTP
42002542009571tRNA-GlyQuickGO ontology
42010142017575tRNA-IleQuickGO ontology
42017842026790tRNA-SerQuickGO ontologyBLASTP
420428420860433putative mutator proteinQuickGO ontology
4208604234542595phage related helicaseQuickGO ontologyBLASTP
423467423751285hypothetical proteinBLASTP
42396242403372tRNA-GluQuickGO ontologyBLASTP
42407142415787tRNA-SerQuickGO ontologyBLASTP
42416742424074tRNA-MetQuickGO ontology
42424442431774tRNA-AspQuickGO ontologyBLASTP
42432442439976tRNA-PheQuickGO ontologyBLASTP
42440442448582tRNA-TyrQuickGO ontologyBLASTP
42449042456071tRNA-TrpQuickGO ontology
42457342464876tRNA-HisQuickGO ontologyBLASTP
42465342472472tRNA-GlnQuickGO ontology
42474842481871tRNA-CysQuickGO ontology
42485642494085tRNA-LeuQuickGO ontologyBLASTP
4250454262211177glycosyltransferaseQuickGO ontologyBLASTP
4262244272791056glycosyltransferaseQuickGO ontologyBLASTP
4272794283041026hypothetical proteinBLASTP
4283654304362072phosphoglycerol transferaseQuickGO ontologyBLASTP
430491430737247hypothetical protein
4307944331562363Ribonuclease RQuickGO ontology
433168433623456SsrA-binding proteinQuickGO ontologyBLASTP
434247435818157216S ribosomal RNAQuickGO ontologyBLASTP
435949438999305123S ribosomal RNAQuickGO ontologyBLASTP
4389904391061175S ribosomal RNAQuickGO ontologyBLASTP
43911943919173tRNA-AsnQuickGO ontology
4394794405021024mannose-specific PTS system component IIABQuickGO ontology
440509441330822mannose-specific PTS system component IICQuickGO ontologyBLASTP
441344442282939mannose-specific PTS system component IIDQuickGO ontologyBLASTP
442289442657369hypothetical proteinBLASTP
442703443584882transcriptional regulatorQuickGO ontologyBLASTP
443767444219453maltose O-acetyltransferaseQuickGO ontologyBLASTP
4442474456321386amino acid permeaseQuickGO ontologyBLASTP