Pre_GI: BLASTP Hits

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Query: NC_006814:403723:411003 Lactobacillus acidophilus NCFM, complete genome

Start: 411003, End: 411611, Length: 609

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism is a normal inhabitant of the human intestinal tract. This strain was isolated from a human in 1970. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014724:439594:447340447340447948609Lactobacillus amylovorus GRL 1112 chromosome, complete genomehypothetical protein2e-92338
NC_015214:437733:444612444612445220609Lactobacillus acidophilus 30SC chromosome, complete genomehypothetical protein2e-92338
NC_018528:446610:452265452265452873609Lactobacillus helveticus R0052 chromosome, complete genomeMembrane protein4e-89327
NC_010080:445398:448172448172448780609Lactobacillus helveticus DPC 4571, complete genomeputative membrane protein9e-89325
NC_015602:117939:122497122497123105609Lactobacillus kefiranofaciens ZW3 chromosome, complete genomehypothetical protein7e-88322
NC_014106:419511:425106425106425714609Lactobacillus crispatus ST1, complete genomeMembrane protein1e-84311
NC_014727:1537183:155327615532761553881606Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,membrane protein1e-50199
NC_005362:550823:555344555344555952609Lactobacillus johnsonii NCC 533, complete genomehypothetical protein4e-50197
NC_013504:447891:452403452403453020618Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein4e-50197
NC_008530:469802:474323474323474940618Lactobacillus gasseri ATCC 33323, complete genomePredicted membrane protein4e-48191
NC_013199:811929:812706812706813338633Lactobacillus rhamnosus Lc 705, complete genomeconserved hypothetical protein (integral membrane protein by homology)2e-26119
NC_013198:813830:818158818158818790633Lactobacillus rhamnosus GG, complete genomeconserved hypothetical protein (integral membrane protein by homology)3e-26118
NC_010999:880878:881660881660882283624Lactobacillus casei, complete genomePutative uncharacterized protein ylfI2e-23108
NC_008526:817628:819063819063819686624Lactobacillus casei ATCC 334, complete genomePredicted membrane protein2e-23108
NC_014334:769205:770640770640771263624Lactobacillus casei str. Zhang chromosome, complete genomehypothetical protein3e-23108
NC_016605:766836:771932771932772564633Pediococcus claussenii ATCC BAA-344 chromosome, complete genomehypothetical protein4e-22104
NC_008525:1202852:121695612169561217582627Pediococcus pentosaceus ATCC 25745, complete genomePredicted membrane protein1e-21103
NC_012470:853561:856218856218856859642Streptococcus equi subsp. zooepidemicus, complete genomemembrane protein4e-2098.2
NC_011134:1222739:123839712383971239044648Streptococcus equi subsp. zooepidemicus str. MGCS10565, completehypothetical membrane spanning protein3e-1995.1
NC_012004:1053682:105693610569361057559624Streptococcus uberis 0140J, complete genomemembrane protein8e-1890.1
NC_007576:435713:441074441074441715642Lactobacillus sakei subsp. sakei 23K, complete genomeHypothetical integral membrane protein1e-1789.7
NC_007929:473500:477044477044477688645Lactobacillus salivarius subsp. salivarius UCC118, complete genomeHypothetical membrane spanning protein3e-1685.1
NC_015975:1493636:151386915138691514495627Lactobacillus ruminis ATCC 27782 chromosome, complete genomeintergral membrane protein3e-1581.3
NC_015697:1814128:181948918194891820142654Lactobacillus reuteri SD2112 chromosome, complete genomeintegral membrane protein9e-1580.1
NC_008262:2498000:250201825020182502668651Clostridium perfringens SM101, complete genomeintegral membrane protein4e-1477.8
NC_009513:618000:622461622461623114654Lactobacillus reuteri F275, complete genomeintegral membrane protein TIGR019062e-1375.5
NC_010723:3530000:353746035374603538140681Clostridium botulinum E3 str. Alaska E43, complete genomeintegral membrane protein2e-1272.8
NC_014393:3650957:365335536533553653984630Clostridium cellulovorans 743B chromosome, complete genomeintegral membrane protein TIGR019065e-1167.8
NC_007530:1459412:146091814609181461604687Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein6e-1167.4
NC_005945:1459357:146087214608721461558687Bacillus anthracis str. Sterne, complete genomehypothetical protein6e-1167.4
NC_010674:3674739:368027836802783680958681Clostridium botulinum B str. Eklund 17B, complete genomeintegral membrane protein2e-1065.9
NC_021182:1473535:148854114885411489209669Clostridium pasteurianum BC1, complete genomeintegral membrane protein TIGR019061e-0756.6
NC_004557:2552418:255468325546832555321639Clostridium tetani E88, complete genomemembrane spanning protein3e-0755.1
NC_010520:3580000:358817935881793588823645Clostridium botulinum A3 str. Loch Maree, complete genomeintegral membrane protein TIGR019064e-0754.7
NC_015520:1619000:162094016209401621647708Mahella australiensis 50-1 BON chromosome, complete genomeintegral membrane protein9e-0753.5
NC_017297:3594000:360255736025573603201645Clostridium botulinum F str. 230613 chromosome, complete genomeintegral membrane protein1e-0653.1
NC_009699:3581376:360394136039413604585645Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein1e-0653.1
NC_009697:3463736:348629534862953486939645Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein1e-0652.8
NC_009495:3502000:351030735103073510951645Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein1e-0652.8
NC_012563:3729817:375238137523813753025645Clostridium botulinum A2 str. Kyoto, complete genomeintegral membrane protein TIGR019061e-0652.8