Pre_GI Gene

Some Help

Host: NC_006371 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006371:1743982 Photobacterium profundum SS9 chromosome 2, complete sequence

Host Lineage: Photobacterium profundum; Photobacterium; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Isolated at a depth of 2500 m from the Sulu Trough. High pressure tolerant bacterium. This bioluminescent genus was originally identified in 1878 in association with hake (a marine fish) in Cape Town, South Africa. This species was originally isolated from an amphipod homogenate enrichment from the Sulu Sea. It is a genetically tractable model system for studies of low temperature and high pressure adaptation, and has been used in studies of mono- and polyunsaturated fatty acid production under these conditions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17439821744926945hypothetical transcription regulator LysR familyQuickGO ontologyBLASTP
17457531746094342hypothetical protein
17463831746859477hypothethical proteinQuickGO ontology
17474491748027579hypothetical protein
17480851748420336Hypothetical conjugal transfer protein TrbCQuickGO ontologyBLASTP
17484311748724294hypothetical TrbD proteinQuickGO ontologyBLASTP
174872617511222397hypothetical TrbE proteinQuickGO ontologyBLASTP
17512221752001780hypothetical proteinBLASTP
17520261752934909hypothetical protein trbBQuickGO ontologyBLASTP
175294417542571314hypothetical TrbL proteinQuickGO ontologyBLASTP
17542601754928669hypothetical conjugal transfer protein TrbFQuickGO ontologyBLASTP
17549411755813873hypothetical TrbG proteinQuickGO ontologyBLASTP
17558171756242426hypothetical protein
175631917574551137hypothetical protein TrbIQuickGO ontologyBLASTP
17574791758453975hypothetical protein
175845317599191467hypothetical proteinBLASTP
17599161760242327hypothetical protein
17603711761039669hypothetical protein
17610841761617534hypothetical protein
176162017632091590hypothetical type II secretion proteinQuickGO ontologyBLASTP
17632061764195990hypothetical protein
17642071764755549hypothetical protein
17647571765269513hypothetical polyproteinQuickGO ontology
17652691766213945hypothetical type IV pilin PilAQuickGO ontology
17662291766648420hypothetical protein
176681117678691059hypothetical protein
17679561768483528hypothetical conjugal transfer protein TraFQuickGO ontologyBLASTP
17684861769013528hypothetical conjugal transfer proteinQuickGO ontologyBLASTP
176902917708911863hypothetical protein TraGQuickGO ontologyBLASTP
17710551771378324hypothetical protein
177139517731611767hypothetical proteinBLASTP
17731581773481324hypothetical TraJ proteinQuickGO ontology
17737561774076321hypothetical protein
17740921774655564hypothetical protein TraLQuickGO ontologyBLASTP
17749501775429480hypothetical protein
17757071776222516hypothetical protein
17763341776588255hypothetical protein
17767611777738978Hypothetical antirestriction proteinQuickGO ontologyBLASTP