Pre_GI Gene

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Host: NC_006361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006361:5146000 Nocardia farcinica IFM 10152, complete genome

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
51460035146854852putative hydrolaseQuickGO ontologyBLASTP
51469205147522603putative transcriptional regulatorQuickGO ontologyBLASTP
514757851493891812putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
514939751505991203putative type III polyketide synthaseQuickGO ontologyBLASTP
515068051521491470hypothetical protein
51524845153290807putative lipoproteinQuickGO ontologyBLASTP
51533175153496180hypothetical protein
51534935154053561hypothetical proteinBLASTP
51540505154433384hypothetical proteinBLASTP
51545075155073567hypothetical proteinBLASTP
51550705155984915hypothetical proteinBLASTP
51559655156291327hypothetical proteinBLASTP
51562935157081789hypothetical proteinBLASTP
515733151584371107putative transposaseQuickGO ontologyBLASTP
51606315161596966putative hydrolaseQuickGO ontologyBLASTP
516157351631081536putative DNA-binding proteinQuickGO ontologyBLASTP
51632045163887684hypothetical proteinBLASTP
516388451650231140hypothetical proteinBLASTP
51650205165685666hypothetical proteinBLASTP
51657275166416690hypothetical proteinBLASTP
51664215166888468putative MutT family proteinQuickGO ontologyBLASTP
51669665167295330hypothetical protein
51673025167505204hypothetical protein
51675095167694186hypothetical protein
5167803516788179tRNA-AlaQuickGO ontology
516796051692701311hypothetical proteinBLASTP
51695355170185651putative ribosomal-protein-alanine N-acetyltransferaseQuickGO ontologyBLASTP
517019851714541257putative molybdopterin biosynthesis proteinQuickGO ontologyBLASTP
51715725172468897putative UTP-glucose-1-phosphate uridylyltransferaseQuickGO ontologyBLASTP
51725915173193603hypothetical proteinBLASTP
51732635173559297hypothetical proteinBLASTP