Pre_GI Gene

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Host: NC_006361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006361:3047788 Nocardia farcinica IFM 10152, complete genome

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30477883048678891putative short chain dehydrogenaseQuickGO ontologyBLASTP
304875330507171965putative acyl-CoA synthetaseQuickGO ontologyBLASTP
30507143051466753putative short chain dehydrogenaseQuickGO ontologyBLASTP
305146330528421380putative transporterQuickGO ontologyBLASTP
30529793053896918putative transcriptional regulatorQuickGO ontologyBLASTP
305391530553421428hypothetical proteinBLASTP
305608330575161434putative restriction-modification system endonucleaseQuickGO ontologyBLASTP
30583323058727396putative transposaseQuickGO ontologyBLASTP
30586753059424750putative transposaseQuickGO ontologyBLASTP
305961130611491539hypothetical proteinBLASTP
30612133061884672putative two-component system response regulatorQuickGO ontologyBLASTP
306188130641602280putative two-component system sensor kinaseQuickGO ontologyBLASTP
30644383064620183hypothetical protein
30646823064858177hypothetical proteinBLASTP
30649983065297300hypothetical protein
30653453065506162hypothetical protein
306556230667941233hypothetical proteinBLASTP
306679530679401146hypothetical proteinBLASTP
306793730690581122hypothetical proteinBLASTP
30691343069883750hypothetical protein
30700023070727726putative recombinaseQuickGO ontologyBLASTP
307071630717621047putative transposaseQuickGO ontologyBLASTP