Pre_GI Gene

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Host: NC_006361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006361:2225072 Nocardia farcinica IFM 10152, complete genome

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2225072222611510443-hydroxybutyryl-CoA dehydrogenaseQuickGO ontologyBLASTP
222611222272121101putative dehydrogenaseQuickGO ontologyBLASTP
222731222283611050hypothetical proteinBLASTP
22284222228871450hypothetical proteinBLASTP
22289862229336351hypothetical proteinBLASTP
22296442230351708hypothetical proteinBLASTP
22303632231076714hypothetical protein
22310832231457375hypothetical protein
223177322329121140putative glycosyltransferaseQuickGO ontologyBLASTP
22330052233421417hypothetical proteinBLASTP
223341822346081191putative transporterQuickGO ontologyBLASTP
2235105223518177tRNA-ProQuickGO ontologyBLASTP
223514822369921845hypothetical proteinBLASTP
22372662237676411putative transposaseQuickGO ontologyBLASTP
22378052238125321putative transposaseQuickGO ontologyBLASTP
223843722413372901putative restriction-modification system endonucleasemethyltransferaseQuickGO ontologyBLASTP
22414342241964531hypothetical proteinBLASTP
22421272243014888hypothetical proteinBLASTP
22431412243521381hypothetical proteinBLASTP
22438632244162300putative integraseQuickGO ontologyBLASTP
224416722451981032putative transposaseQuickGO ontologyBLASTP
22452702245428159hypothetical protein
22454862245704219hypothetical protein
22457072246141435hypothetical protein
22464722246744273hypothetical protein
22467732247459687hypothetical proteinBLASTP
22474702248288819hypothetical protein
22483442248985642hypothetical proteinBLASTP
22489842249274291hypothetical protein
22492932249631339hypothetical protein
22496782250001324putative ScnB homologQuickGO ontologyBLASTP
22499982250708711putative ScnC homologQuickGO ontologyBLASTP
22507052251007303putative ScnA homologQuickGO ontologyBLASTP
22510042251429426putative ScnB homologQuickGO ontologyBLASTP
225155822527481191putative monooxygenaseQuickGO ontologyBLASTP
22528602253078219hypothetical proteinBLASTP
22532802253498219hypothetical protein
22535242253745222hypothetical protein
225397722550531077hypothetical proteinBLASTP
225541022567801371putative transporterQuickGO ontologyBLASTP