Pre_GI Gene

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Host: NC_006361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006361:1665378 Nocardia farcinica IFM 10152, complete genome

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16650351665385351hypothetical protein
16653781665764387hypothetical proteinBLASTP
16657671666222456hypothetical proteinBLASTP
166622216672951074hypothetical proteinBLASTP
16672921667687396hypothetical proteinBLASTP
16676801668288609hypothetical proteinBLASTP
16682851668887603hypothetical protein
16688841669051168hypothetical protein
16690441669268225hypothetical protein
16692651669525261hypothetical protein
16695221669689168hypothetical protein
16696861670051366hypothetical protein
16700481670428381hypothetical proteinBLASTP
16704251670676252hypothetical protein
167067716718971221putative transposaseQuickGO ontologyBLASTP
16720021672331330hypothetical protein
16726251673275651hypothetical protein
16733511673602252hypothetical protein
16737721674026255hypothetical proteinBLASTP
16740511674416366hypothetical protein
16744091674621213hypothetical protein
16747311674973243hypothetical protein
167532316764681146putative transposaseQuickGO ontologyBLASTP
16764851676934450hypothetical protein
16769311677107177hypothetical protein
16771071677457351hypothetical proteinBLASTP
16781561678695540hypothetical proteinBLASTP
167874516797461002hypothetical proteinBLASTP
16797241680326603hypothetical proteinBLASTP
168033116817791449hypothetical proteinBLASTP
168177916837101932hypothetical proteinBLASTP
16837751684314540hypothetical protein
16843381684706369hypothetical protein
168472216857501029hypothetical proteinBLASTP
16857471686025279hypothetical protein
16860121686407396hypothetical protein
16864041686796393hypothetical protein
16868001686997198hypothetical protein
16869971687347351hypothetical protein
16873441687784441hypothetical protein
16878331688651819hypothetical protein
16886511689085435hypothetical protein
16890821689486405hypothetical protein
168949116939754485putative phage tailQuickGO ontologyBLASTP
16939721694913942putative phage minor tailQuickGO ontologyBLASTP
169491016965621653putative phage tailQuickGO ontologyBLASTP
16965721697156585hypothetical protein
16971561697713558hypothetical proteinBLASTP
16977131698645933hypothetical protein
16986421698887246hypothetical protein
16988841699177294hypothetical protein
16991551699367213hypothetical protein
16993641699732369hypothetical protein
16997291700394666hypothetical protein
17004471700728282hypothetical protein
170072517019751251hypothetical protein
17019721702289318hypothetical protein
17023301702635306hypothetical proteinBLASTP
170263517038191185hypothetical protein
17038291704149321hypothetical protein
17041461704505360hypothetical protein
17046061704986381hypothetical protein
17050271705194168hypothetical protein
17051911705544354hypothetical proteinBLASTP
170559917067741176putative DNA-binding proteinQuickGO ontologyBLASTP
17069941707866873putative phage integraseQuickGO ontologyBLASTP