Pre_GI Gene

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Host: NC_006350 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006350:3329477 Burkholderia pseudomallei K96243 chromosome 1, complete sequence

Host Lineage: Burkholderia pseudomallei; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was a clinical isolate from Thailand. The genome of this organism carries many genomic islands as compared to the related organism B. mallei, suggesting extensive horizontal transfer. Opportunistic pathogen. This species is an opportunistic pathogen and can cause pneumonia, bacteremia, and melioidosis. It is normally found in terrestrial environments and has been recovered from rice paddies and moist tropical soil. It is endemic in Asia and Australia, but can be found in other parts of the world. The organism can exist intracellularly and can spread through the bloodstream (bacteremia).


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
33285633329480918UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
332947733371177641capsular polysaccharide biosynthesis fatty acid synthaseQuickGO ontologyBLASTP
333712033386521533putative capsular polysaccharide biosynthesis transmembrane proteinQuickGO ontologyBLASTP
33386543339442789putative capsular polysaccharide biosynthesis dehydrogenasereductase proteinQuickGO ontologyBLASTP
333943933406411203putative capsule polysaccharide biosynthesisexport proteinQuickGO ontologyBLASTP
33409083341477570putative D-glycero-d-manno-heptose 17-bisphosphate phosphataseQuickGO ontologyBLASTP
33414743342166693putative D-glycero-d-manno-heptose 1-phosphate guanosyltransferaseQuickGO ontologyBLASTP
33421683342761594putative sedoheptulose 7-phosphate isomeraseQuickGO ontologyBLASTP
334274333437831041putative sugar kinaseQuickGO ontologyBLASTP
334379933448121014putative GDP sugar epimerasedehydratase proteinQuickGO ontologyBLASTP
33448223345664843putative capsular polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
33456613346599939putative capsular polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
334661433484101797putative glycosyl transferaseQuickGO ontologyBLASTP
33484073349348942putative capsular polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
334935833506801323putative capsule polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
335070333522261524putative glycosyltransferaseQuickGO ontologyBLASTP
33522593352915657putative ATP-binding ABC transporter capsular polysaccharide export proteinQuickGO ontologyBLASTP
33529123353694783putative capsular polysaccharide export ABC transporter transmembrane proteinQuickGO ontologyBLASTP
335370133548491149putative capsule polysaccharide export ABC transporter transmembrane proteinQuickGO ontologyBLASTP
33549703355179210BLASTP
335533033564931164putative capsular polysaccharide biosynthesisexport proteinQuickGO ontologyBLASTP
335667433578251152putative capsular polysaccharide glycosyltransferase biosynthesis proteinQuickGO ontologyBLASTP
335782633598412016putative capsule polysaccharide export proteinQuickGO ontologyBLASTP
336024033616671428putative GDP-mannose pyrophosphorylaseQuickGO ontologyBLASTP
33619293362774846hypothetical proteinBLASTP
33628403363712873hypothetical proteinBLASTP
33640333364776744putative DedA family transmembrane proteinQuickGO ontologyBLASTP
336489833669522055DNA mismatch repair proteinQuickGO ontologyBLASTP
33669493367923975tRNA delta2-isopentenylpyrophosphate transferaseQuickGO ontologyBLASTP