Pre_GI Gene

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Host: NC_006177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006177:3457637 Symbiobacterium thermophilum IAM 14863, complete genome

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
345763734588691233threonine dehydrataseQuickGO ontologyBLASTP
34588773459689813purine operon repressorQuickGO ontologyBLASTP
34597323460487756hypothetical proteinBLASTP
34605853461433849putative 4-diphosphocytidyl-2-C-methyl-D- erythritol kinaseQuickGO ontologyBLASTP
34614963461774279hypothetical proteinBLASTP
34619713462450480hypothetical proteinBLASTP
34624703463327858dimethyladenosine transferaseQuickGO ontologyBLASTP
34633923464276885hypothetical proteinBLASTP
3464421346449979tRNA-ArgQuickGO ontology
3464580346465879tRNA-GluQuickGO ontology
3464661346473878tRNA-ValQuickGO ontology
346480134649141145S ribosomal RNAQuickGO ontology
34649553467903294923S ribosomal RNAQuickGO ontologyBLASTP
34681213469692157216S ribosomal RNAQuickGO ontologyBLASTP
34700123470788777TatD-related DNaseQuickGO ontologyBLASTP
347085734728121956methionyl-tRNA synthetaseQuickGO ontologyBLASTP
34734013473670270sporulation-related transcriptional regulator AbrBQuickGO ontologyBLASTP
34737263474481756tetrapyrrole methylase family proteinQuickGO ontologyBLASTP
347459334758731281putative signal peptidase IIQuickGO ontologyBLASTP
34759753476973999DNA polymerase III delta subunitQuickGO ontologyBLASTP
34769863477315330hypothetical proteinBLASTP
34773373477981645thymidylate kinaseQuickGO ontologyBLASTP
347798834793971410argininelysineornithine decarboxylaseQuickGO ontologyBLASTP
347945134804761026DNA replication protein DnaCQuickGO ontologyBLASTP
348043334814641032putative chromosome replication initiation proteinQuickGO ontologyBLASTP