Pre_GI Gene

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Host: NC_005362 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005362:1651767 Lactobacillus johnsonii NCC 533, complete genome

Host Lineage: Lactobacillus johnsonii; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is a human isolate from the Nestle strain collection that has been studied for immunomodulation as well as pathogen inhibition. Probiotic microorganism. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus johnsonii is found in the human gut. It is a member of the acidophilus group of intestinal lactobacilli that has been extensively studied for their "probiotic" activities.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
165176716536471881hypothetical proteinBLASTP
16537601654008249hypothetical proteinBLASTP
16539631654445483hypothetical proteinBLASTP
16546621655087426hypothetical proteinBLASTP
165530416579132610aldehyde-alcohol dehydrogenaseQuickGO ontologyBLASTP
165822816596011374hypothetical proteinBLASTP
1659716165978873tRNA-AsnQuickGO ontology
165980116599171175S ribosomal RNAQuickGO ontologyBLASTP
16599041662954305123S ribosomal RNAQuickGO ontologyBLASTP
16630541664704165116S ribosomal RNAQuickGO ontologyBLASTP
1665073166516290tRNA-SerQuickGO ontologyBLASTP
1665165166523874tRNA-IleQuickGO ontology
1665247166532074tRNA-GlyQuickGO ontology
1665338166541073tRNA-PheQuickGO ontologyBLASTP
1665415166548773tRNA-AspQuickGO ontology
1665491166556474tRNA-MetQuickGO ontology
1665596166566974tRNA-MetQuickGO ontologyBLASTP
1665683166575674tRNA-MetQuickGO ontology
1665787166586074tRNA-ProQuickGO ontology
1665866166593974tRNA-ArgQuickGO ontologyBLASTP
1665949166603486tRNA-LeuQuickGO ontologyBLASTP
1666047166611872tRNA-GlyQuickGO ontology
1666137166620973tRNA-ThrQuickGO ontologyBLASTP
1666211166629585tRNA-LeuQuickGO ontologyBLASTP
1666316166638873tRNA-LysQuickGO ontologyBLASTP
1666391166646373tRNA-ValQuickGO ontologyBLASTP
166646816665841175S ribosomal RNAQuickGO ontologyBLASTP
16665711669621305123S ribosomal RNAQuickGO ontologyBLASTP
16697211671371165116S ribosomal RNAQuickGO ontologyBLASTP
167193816739291992hypothetical proteinBLASTP
167401416750301017hypothetical proteinBLASTP
167503016760731044hypothetical proteinBLASTP
167606616772321167hypothetical proteinBLASTP
1677348167743184tRNA-LeuQuickGO ontologyBLASTP
1677463167753371tRNA-CysQuickGO ontologyBLASTP
1677554167762572tRNA-GlnQuickGO ontology
1677630167770576tRNA-HisQuickGO ontologyBLASTP
1677720167779071tRNA-TrpQuickGO ontology
1677798167787982tRNA-TyrQuickGO ontologyBLASTP
1677884167795673tRNA-PheQuickGO ontologyBLASTP
1677962167803473tRNA-AspQuickGO ontology
1678038167811174tRNA-MetQuickGO ontology
1678119167820991tRNA-SerQuickGO ontologyBLASTP
1678236167830772tRNA-GluQuickGO ontologyBLASTP
16785421678901360hypothetical proteinBLASTP
1679522167961190tRNA-SerQuickGO ontologyBLASTP
1679614167968774tRNA-IleQuickGO ontology
1679696167976974tRNA-GlyQuickGO ontology
1679787167985973tRNA-PheQuickGO ontologyBLASTP
1679864167993673tRNA-AspQuickGO ontology
1679940168001374tRNA-MetQuickGO ontology
1680045168011874tRNA-MetQuickGO ontologyBLASTP
1680132168020574tRNA-MetQuickGO ontology
1680236168030974tRNA-ProQuickGO ontology
1680315168038874tRNA-ArgQuickGO ontologyBLASTP
1680398168048386tRNA-LeuQuickGO ontologyBLASTP
1680496168056772tRNA-GlyQuickGO ontology
1680586168065873tRNA-ThrQuickGO ontologyBLASTP
1680660168074485tRNA-LeuQuickGO ontologyBLASTP
1680765168083773tRNA-LysQuickGO ontologyBLASTP
1680840168091273tRNA-ValQuickGO ontologyBLASTP
168091716810331175S ribosomal RNAQuickGO ontologyBLASTP
16810201684070305123S ribosomal RNAQuickGO ontologyBLASTP
16841701685820165116S ribosomal RNAQuickGO ontologyBLASTP
168628216875921311seryl-tRNA synthetaseQuickGO ontologyBLASTP
16878081688362555hypothetical proteinBLASTP
16883621688961600hypothetical proteinBLASTP
16891271689933807hypothetical proteinBLASTP
16899201690762843hypothetical proteinBLASTP