Pre_GI Gene

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Host: NC_004463 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004463:2158116 Bradyrhizobium japonicum USDA 110, complete genome

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21581162159030915hypothetical protein
21606542160932279hypothetical proteinBLASTP
216101321623591347putative transposaseQuickGO ontologyBLASTP
21627442163412669hypothetical protein
21634202163800381putative transposaseQuickGO ontologyBLASTP
216393221656021671hypothetical protein
21655142166284771hypothetical protein
21662962166565270hypothetical protein
21668172167335519hypothetical proteinBLASTP
216774421690151272coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
21697172170010294hypothetical protein
21707242171440717hypothetical proteinBLASTP
21719272172199273hypothetical proteinBLASTP
21721712172533363hypothetical proteinBLASTP
21731712174097927hypothetical proteinBLASTP
21744082174671264hypothetical protein
21747192174964246hypothetical proteinBLASTP
21755942175821228NolZQuickGO ontologyBLASTP
21759282176656729NolYQuickGO ontologyBLASTP
21777192178312594similar to ABC transporter amino acid binding proteinQuickGO ontologyBLASTP
21784192179081663similar to ABC transporter amino acid binding proteinQuickGO ontologyBLASTP
21791342179778645transcriptional regulatory proteinQuickGO ontologyBLASTP
21799702180161192hypothetical proteinBLASTP
21807662181758993transcriptional regulatory proteinQuickGO ontologyBLASTP
21817992182197399hypothetical proteinBLASTP
21823922183336945transcriptional regulatory proteinQuickGO ontologyBLASTP
21834502184088639NodYQuickGO ontologyBLASTP
21841302184762633acyltransferase NodAQuickGO ontologyBLASTP
21847592185418660de N-acatylaseQuickGO ontologyBLASTP
218543321868901458chitin synthaseQuickGO ontologyBLASTP
21869192187446528N-methyl transferaseQuickGO ontologyBLASTP
2187460218916917106-O-carbamoyl transferaseQuickGO ontologyBLASTP
21891712190091921transporter of Nod factorsQuickGO ontologyBLASTP
21900952190883789NodJ proteinQuickGO ontologyBLASTP
21909162191089174NolM proteinQuickGO ontologyBLASTP
21911272191522396NolN proteinQuickGO ontologyBLASTP
219151921931651647NolO proteinQuickGO ontologyBLASTP
219333121944431113NodZ proteinQuickGO ontologyBLASTP
21951722196008837oxidoreductaseQuickGO ontologyBLASTP
219619221980091818nif-specific regulatory proteinQuickGO ontologyBLASTP
21985272199393867electron transfer flavoprotein beta chainQuickGO ontologyBLASTP
21995262199927402hypothetical proteinBLASTP
22001382200560423hypothetical proteinBLASTP
220053322017561224hypothetical proteinBLASTP
22017412202418678hypothetical proteinBLASTP
220271922040651347putative transposaseQuickGO ontologyBLASTP
22041082204671564hypothetical protein
220542822067381311hypothetical proteinBLASTP
22067662207545780hypothetical proteinBLASTP
22078962208261366hypothetical proteinBLASTP
22086752208908234hypothetical proteinBLASTP
220910022101131014anthranilate phosphoribosyltransferaseQuickGO ontologyBLASTP
22105432210842300hypothetical proteinBLASTP
22113372211543207hypothetical proteinBLASTP
221305222142961245probable maturase reverse transcriptaseQuickGO ontologyBLASTP
22144222214727306putative transposaseQuickGO ontologyBLASTP
22147052215577873putative transposaseQuickGO ontologyBLASTP
22160552216624570hypothetical proteinBLASTP
22163022216712411putative transposaseQuickGO ontologyBLASTP
22177942218213420hypothetical proteinBLASTP
22188242219720897hypothetical proteinBLASTP
222096022226001641chaperonin GroELQuickGO ontologyBLASTP
22226832222997315co-chaperonin GroESQuickGO ontologyBLASTP
22233462223558213hypothetical protein
22239472224594648nodulation proteinQuickGO ontologyBLASTP
222541722266131197phenolhydroxylase homologQuickGO ontologyBLASTP
22278352228113279hypothetical proteinBLASTP
22284802229235756carbonic anhydraseQuickGO ontologyBLASTP
22292322230020789hypothetical proteinBLASTP
22310802231907828nodulate formation efficiency C proteinQuickGO ontologyBLASTP
2233096223544123465-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferaseQuickGO ontologyBLASTP
22355492235866318hypothetical protein
22359372236065129hypothetical proteinBLASTP