Pre_GI: BLASTN Hits

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Query: NC_004463:2158116 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2158116, End: 2236099, Length: 77984

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:21180002118000214009922100Bradyrhizobium japonicum USDA 110, complete genome03025BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome4e-150541BLASTN svgBLASTP svg
NC_019973:60287956028795605165122857Mesorhizobium australicum WSM2073, complete genome2e-148535BLASTN svgBLASTP svg
NC_015675:66518996651899667736225464Mesorhizobium opportunistum WSM2075 chromosome, complete genome2e-148535BLASTN svgBLASTP svg
NC_011004:4947980*4947980497058322604Rhodopseudomonas palustris TIE-1, complete genome1e-128470BLASTN svgBLASTP svg
NC_010338:4481356*4481356450312821773Caulobacter sp. K31, complete genome1e-122450BLASTN svgBLASTP svg
NC_000914:13553413553415858523052Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence1e-115426BLASTN svgBLASTP svg
NC_007643:185135*18513520908123947Rhodospirillum rubrum ATCC 11170, complete genome7e-93351BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete5e-69272BLASTN svgBLASTP svg
NC_007722:85112985112987648525357Erythrobacter litoralis HTCC2594, complete genome5e-63252BLASTN svgBLASTP svg
NC_009720:41242554124255415127427020Xanthobacter autotrophicus Py2, complete genome3e-61246BLASTN svgBLASTP svg
NC_011894:40669264066926411059943674Methylobacterium nodulans ORS 2060, complete genome2e-56230BLASTN svgBLASTP svg
NC_009720:216589*21658924097524387Xanthobacter autotrophicus Py2, complete genome7e-56228BLASTN svgBLASTP svg
NC_004463:90313319031331904979018460Bradyrhizobium japonicum USDA 110, complete genome4e-42182BLASTN svgBLASTP svg
NC_015376:20100092010009204069430686Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-40176BLASTN svgBLASTP svg
NC_019973:5899142*5899142593179432653Mesorhizobium australicum WSM2073, complete genome9e-37165BLASTN svgBLASTP svg
NC_015675:65385006538500655750519006Mesorhizobium opportunistum WSM2075 chromosome, complete genome9e-37165BLASTN svgBLASTP svg
NC_014923:59701825970182600283732656Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete9e-37165BLASTN svgBLASTP svg
NC_002678:3210751*3210751323209921349Mesorhizobium loti MAFF303099, complete genome2e-34157BLASTN svgBLASTP svg
NC_019973:59898165989816601096821153Mesorhizobium australicum WSM2073, complete genome2e-28137BLASTN svgBLASTP svg
NC_015675:66152456615245663775722513Mesorhizobium opportunistum WSM2075 chromosome, complete genome2e-28137BLASTN svgBLASTP svg
NC_014923:60608596060859607977518917Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete2e-28137BLASTN svgBLASTP svg
NC_004310:508483*50848353488526403Brucella suis 1330 chromosome I, complete sequence8e-28135BLASTN svgBLASTP svg
NC_010169:527500*52750055287125372Brucella suis ATCC 23445 chromosome I, complete sequence8e-28135BLASTN svgBLASTP svg
NC_015857:531314*53131455683525522Brucella pinnipedialis B2/94 chromosome chromosome 1, complete8e-28135BLASTN svgBLASTP svg
NC_012850:45931545931548320123887Rhizobium leguminosarum bv. trifolii WSM1325, complete genome5e-26129BLASTN svgBLASTP svg
NC_006932:531000*53100055709926100Brucella abortus biovar 1 str. 9-941 chromosome I, complete2e-25127BLASTN svgBLASTP svg
NC_007618:52640052640055279626397Brucella melitensis biovar Abortus 2308 chromosome I, complete2e-25127BLASTN svgBLASTP svg
NC_010103:507482*50748253233624855Brucella canis ATCC 23365 chromosome I, complete sequence2e-25127BLASTN svgBLASTP svg
NC_010742:529500*52950055481725318Brucella abortus S19 chromosome 1, complete sequence2e-25127BLASTN svgBLASTP svg
NC_014623:58859035885903590954323641Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-25127BLASTN svgBLASTP svg
NC_020126:6344827*6344827637873333907Myxococcus stipitatus DSM 14675, complete genome2e-25127BLASTN svgBLASTP svg
NC_016002:3704006*3704006373059326588Pseudogulbenkiania sp. NH8B, complete genome7e-25125BLASTN svgBLASTP svg
NC_010688:60501860501862846423447Xanthomonas campestris pv. campestris, complete genome7e-25125BLASTN svgBLASTP svg
NC_007086:62689162689165055223662Xanthomonas campestris pv. campestris str. 8004, complete genome7e-25125BLASTN svgBLASTP svg
NC_003902:62482862482864848923662Xanthomonas campestris pv. campestris str. ATCC 33913, complete7e-25125BLASTN svgBLASTP svg
NC_014830:3156873*3156873318066423792Intrasporangium calvum DSM 43043 chromosome, complete genome3e-21113BLASTN svgBLASTP svg
NC_011666:16019831601983162289320911Methylocella silvestris BL2, complete genome1e-20111BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-20111BLASTN svgBLASTP svg
NC_007712:532500*53250055659924100Sodalis glossinidius str. 'morsitans', complete genome1e-20111BLASTN svgBLASTP svg
NC_014216:2538500*2538500256387025371Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome4e-20109BLASTN svgBLASTP svg
NC_005085:43353334335333437106535733Chromobacterium violaceum ATCC 12472, complete genome4e-20109BLASTN svgBLASTP svg
NC_010557:67965667965674320963554Burkholderia ambifaria MC40-6 chromosome 3, complete sequence2e-19107BLASTN svgBLASTP svg
NC_008095:55277075527707555977932073Myxococcus xanthus DK 1622, complete genome3e-18103BLASTN svgBLASTP svg
NC_011420:3822765*3822765384728424520Rhodospirillum centenum SW, complete genome1e-17101BLASTN svgBLASTP svg
NC_007951:20458302045830206373317904Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-1697.6BLASTN svgBLASTP svg
NC_007644:22055992205599223465329055Moorella thermoacetica ATCC 39073, complete genome2e-1697.6BLASTN svgBLASTP svg
NC_015711:74715007471500749740725908Myxococcus fulvus HW-1 chromosome, complete genome7e-1695.6BLASTN svgBLASTP svg
NC_015563:19513681951368199617644809Delftia sp. Cs1-4 chromosome, complete genome3e-1593.7BLASTN svgBLASTP svg
NC_014221:3175013*3175013320035525343Truepera radiovictrix DSM 17093 chromosome, complete genome3e-1593.7BLASTN svgBLASTP svg
NC_007626:959684*959684100429644613Magnetospirillum magneticum AMB-1, complete genome4e-1489.7BLASTN svgBLASTP svg
NC_013209:19253411925341195459929259Acetobacter pasteurianus IFO 3283-01, complete genome4e-1489.7BLASTN svgBLASTP svg
NC_015850:2259769*2259769228620926441Acidithiobacillus caldus SM-1 chromosome, complete genome4e-1489.7BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome6e-1385.7BLASTN svgBLASTP svg
NC_010581:29439132943913296366019748Beijerinckia indica subsp. indica ATCC 9039, complete genome6e-1385.7BLASTN svgBLASTP svg
NC_004463:18497184974626527769Bradyrhizobium japonicum USDA 110, complete genome3e-1283.8BLASTN svgBLASTP svg
NC_008700:36923333692333371504922717Shewanella amazonensis SB2B, complete genome3e-1283.8BLASTN svgBLASTP svg
NC_013508:34361734361737314529529Edwardsiella tarda EIB202, complete genome3e-1283.8BLASTN svgBLASTP svg
NC_015186:21656282165628218853522908Acidiphilium multivorum AIU301, complete genome3e-1283.8BLASTN svgBLASTP svg
NC_015388:2143329*2143329217016326835Desulfobacca acetoxidans DSM 11109 chromosome, complete genome1e-1181.8BLASTN svgBLASTP svg
NC_014039:499233*49923352279623564Propionibacterium acnes SK137 chromosome, complete genome1e-1181.8BLASTN svgBLASTP svg
NC_006085:481231*48123150479923569Propionibacterium acnes KPA171202, complete genome1e-1181.8BLASTN svgBLASTP svg
NC_015656:36534403653440367842924990Frankia symbiont of Datisca glomerata chromosome, complete genome4e-1179.8BLASTN svgBLASTP svg
NC_013510:888542*88854291609927558Thermomonospora curvata DSM 43183, complete genome4e-1179.8BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome2e-1077.8BLASTN svgBLASTP svg
NC_003296:16850616850618825219747Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-1077.8BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-1077.8BLASTN svgBLASTP svg
NC_013956:45500045500047503720038Pantoea ananatis LMG 20103 chromosome, complete genome2e-1077.8BLASTN svgBLASTP svg
NC_015856:43425004342500437154729048Collimonas fungivorans Ter331 chromosome, complete genome2e-1077.8BLASTN svgBLASTP svg
NC_015186:36502*365025988323382Acidiphilium multivorum AIU301, complete genome6e-1075.8BLASTN svgBLASTP svg
NC_007626:10910001091000111043819439Magnetospirillum magneticum AMB-1, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_007626:3393940*3393940344229748358Magnetospirillum magneticum AMB-1, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_007626:35222653522265361842896164Magnetospirillum magneticum AMB-1, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_010505:1205747*1205747122904923303Methylobacterium radiotolerans JCM 2831, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_020181:3518396*3518396354042322028Enterobacter aerogenes EA1509E, complete genome1e-0871.9BLASTN svgBLASTP svg
NC_015663:19348631934863195458219720Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-0871.9BLASTN svgBLASTP svg
NC_009648:4958500*4958500498569827199Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome4e-0869.9BLASTN svgBLASTP svg
NC_014394:94201594201596663724623Gallionella capsiferriformans ES-2 chromosome, complete genome4e-0869.9BLASTN svgBLASTP svg
NC_012808:37118063711806373409922294Methylobacterium extorquens AM1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012808:1220378*1220378126948449107Methylobacterium extorquens AM1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_011144:2710876*2710876272938418509Phenylobacterium zucineum HLK1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_011144:26742422674242270317628935Phenylobacterium zucineum HLK1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_011144:10739441073944109429420351Phenylobacterium zucineum HLK1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_010717:12950012950015009920600Xanthomonas oryzae pv. oryzae PXO99A, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_006834:13950013950015810918610Xanthomonas oryzae pv. oryzae KACC10331, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012808:38977513897751392263924889Methylobacterium extorquens AM1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012808:39729833972983399542222440Methylobacterium extorquens AM1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012811:41077641077643723726462Methylobacterium extorquens AM1 megaplasmid, complete sequence1e-0767.9BLASTN svgBLASTP svg
NC_012811:11053951105395112959924205Methylobacterium extorquens AM1 megaplasmid, complete sequence1e-0767.9BLASTN svgBLASTP svg
NC_012808:92198592198594462922645Methylobacterium extorquens AM1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012808:806432*80643283135724926Methylobacterium extorquens AM1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012808:48777034877703489559917897Methylobacterium extorquens AM1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012808:4235567*4235567425812622560Methylobacterium extorquens AM1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012808:420334*42033444610925776Methylobacterium extorquens AM1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012808:4137000*4137000416801731018Methylobacterium extorquens AM1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_004463:90872909087290911099923710Bradyrhizobium japonicum USDA 110, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_007974:10078341007834103035922526Ralstonia metallidurans CH34 chromosome 2, complete sequence6e-0765.9BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_011768:1718869*1718869178184662978Desulfatibacillum alkenivorans AK-01, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010125:10517351051735108259930865Gluconacetobacter diazotrophicus PAl 5, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010125:14850014850017622727728Gluconacetobacter diazotrophicus PAl 5, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010125:15383351538335158603047696Gluconacetobacter diazotrophicus PAl 5, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010125:28136532813653283723423582Gluconacetobacter diazotrophicus PAl 5, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010125:38171138171140405422344Gluconacetobacter diazotrophicus PAl 5, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010125:955863*955863100278546923Gluconacetobacter diazotrophicus PAl 5, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010506:51950005195000521688621887Shewanella woodyi ATCC 51908, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010725:4035397*4035397410959974203Methylobacterium populi BJ001, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_011983:17460001746000176852422525Agrobacterium radiobacter K84 chromosome 2, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015573:29009062900906293080529900Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_013850:49933074993307502215628850Klebsiella variicola At-22 chromosome, complete genome9e-0661.9BLASTN svgBLASTP svg
NC_011901:62571262571266531339602Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete9e-0661.9BLASTN svgBLASTP svg
NC_010529:29650029650034723950740Cupriavidus taiwanensis plasmid pRALTA, complete sequence9e-0661.9BLASTN svgBLASTP svg