Pre_GI Gene

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Host: NC_004463 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004463:1992000 Bradyrhizobium japonicum USDA 110, complete genome

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
199218219944972316hypothetical proteinBLASTP
19946931995355663hypothetical proteinBLASTP
199536619966581293RhcC2 proteinQuickGO ontologyBLASTP
19968471997536690two-component response regulatorQuickGO ontologyBLASTP
19975761997956381hypothetical proteinBLASTP
19981731998349177hypothetical proteinBLASTP
199955020006171068hypothetical proteinBLASTP
20012162001650435VirK protein homologQuickGO ontologyBLASTP
20021132002982870hypothetical proteinBLASTP
20035482003700153hypothetical proteinBLASTP
20041272004450324hypothetical proteinBLASTP
200442820059091482hypothetical proteinBLASTP
20060942006975882similar to pantoate--beta-alanine ligaseQuickGO ontologyBLASTP
200752620087671242cytochrome P450 family proteinQuickGO ontologyBLASTP
200919420114372244hypothetical proteinBLASTP
201176820127781011putative transposaseQuickGO ontologyBLASTP
20129212013214294putative transposaseQuickGO ontologyBLASTP
20132922013564273hypothetical proteinBLASTP
20137982014181384hypothetical proteinBLASTP
20142892014834546hypothetical proteinBLASTP
20149862015336351hypothetical proteinBLASTP
20151862015749564putative transposaseQuickGO ontologyBLASTP
20159742016516543hypothetical proteinBLASTP
20170702017276207hypothetical protein
201766620190571392citrate-proton symporterQuickGO ontologyBLASTP
20193392019713375putative transposaseQuickGO ontologyBLASTP
20197332020419687putative transposaseQuickGO ontologyBLASTP
20201402020712573hypothetical proteinBLASTP
20208832021230348hypothetical proteinBLASTP
20223242022899576hypothetical proteinBLASTP
20236762023921246hypothetical protein
20244382024725288hypothetical protein
202505520268631809hypothetical proteinBLASTP
20272462027638393putative transposaseQuickGO ontologyBLASTP
20277342028006273putative transposaseQuickGO ontologyBLASTP
20287452029161417hypothetical proteinBLASTP
20292672029830564hypothetical proteinBLASTP
202984620311741329hypothetical proteinBLASTP
20312862031474189hypothetical protein
20325812033195615hypothetical proteinBLASTP
20343192035080762transcriptional regulatory proteinQuickGO ontologyBLASTP
20358432036214372hypothetical proteinBLASTP
20364752036909435hypothetical proteinBLASTP
203737420388281455DNA-directed RNA polymerase subunit NQuickGO ontologyBLASTP
20395132039788276hypothetical proteinBLASTP
20398162040094279hypothetical protein
20401262040317192hypothetical protein
20411252041355231hypothetical protein
20415352041966432hypothetical protein
204231220436971386ABC transporter substrate-binding proteinQuickGO ontologyBLASTP