Pre_GI: BLASTP Hits

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Query: NC_004463:1992000:2006094 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2006094, End: 2006975, Length: 882

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:8221992:825262982526298253510882Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-170598
NC_013961:3269368:327980932798093280732924Erwinia amylovora, complete genomeputative pantoate-beta-alanine ligase1e-52206
NC_000853:1071078:109403210940321094874843Thermotoga maritima MSB8, complete genomepantoate--beta-alanine ligase1e-24113
NC_012483:2338392:234890423489042349803900Acidobacterium capsulatum ATCC 51196, complete genomepantoate--beta-alanine ligase1e-23110
NC_009523:907775:921934921934922770837Roseiflexus sp. RS-1 chromosome, complete genomepantoate--beta-alanine ligase1e-23110
NC_002939:1866651:186969318696931870544852Geobacter sulfurreducens PCA, complete genomepantoate--beta-alanine ligase4e-22105
NC_016077:1278104:129930212993021300159858Acidaminococcus intestini RyC-MR95 chromosome, complete genomepantothenate synthetase3e-22105
NC_017243:2813733:283625028362502837086837Brachyspira intermedia PWS/A chromosome, complete genomepantoate--beta-alanine ligase2e-21103
NC_012563:519037:544976544976545821846Clostridium botulinum A2 str. Kyoto, complete genomepantoate--beta-alanine ligase2e-21103
NC_013204:3491441:349965734996573500502846Eggerthella lenta DSM 2243, complete genomepantoate/beta-alanine ligase1e-20100
NC_013131:9711508:971064597106459711511867Catenulispora acidiphila DSM 44928, complete genomepantoate/beta-alanine ligase2e-20100
NC_009482:1761529:1788661178866117901991539Synechococcus sp. RCC307 chromosome, complete genomebifunctional pantoate ligase/cytidylate kinase2e-2099.8
NC_014150:2201251:224150022415002242330831Brachyspira murdochii DSM 12563 chromosome, complete genomepantoate/beta-alanine ligase3e-2099.4
NC_017249:7993713:800777480077748008625852Bradyrhizobium japonicum USDA 6, complete genomepantoate--beta-alanine ligase4e-1995.5
NC_004463:2262467:227187022718702272721852Bradyrhizobium japonicum USDA 110, complete genomepantoate--beta-alanine ligase5e-1995.1
NC_007530:1459412:147261614726161473464849Bacillus anthracis str. 'Ames Ancestor', complete genomepantoate--beta-alanine ligase3e-1892.4
NC_005945:1459357:147257014725701473418849Bacillus anthracis str. Sterne, complete genomepantoate--beta-alanine ligase3e-1892.4
NC_000911:1718820:1740834174083417423751542Synechocystis sp. PCC 6803, complete genomepantothenate synthetase/cytidylate kinase4e-1892
NC_017039:1717848:1739862173986217414031542Synechocystis sp. PCC 6803 substr. PCC-P, complete genomebifunctional pantothenate synthetase/cytidylate kinase4e-1892
NC_017052:1717836:1739850173985017413911542Synechocystis sp. PCC 6803 substr. PCC-N, complete genomebifunctional pantothenate synthetase/cytidylate kinase4e-1892
NC_017277:1717637:1739651173965117411921542Synechocystis sp. PCC 6803, complete genomebifunctional pantothenate synthetase/cytidylate kinase4e-1892
NC_013223:1188500:119068011906801191528849Desulfohalobium retbaense DSM 5692, complete genomepantoate/beta-alanine ligase8e-1891.3
NC_012225:2474042:247826724782672479103837Brachyspira hyodysenteriae WA1, complete genomepantoate-beta-alanine ligase; pantothenate synthase1e-1687
NC_019903:83857:870288702887876849Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,pantothenate synthetase1e-1687
NC_010498:153755:158307158307159158852Escherichia coli SMS-3-5, complete genomepantoate--beta-alanine ligase3e-1685.9
NC_013361:145461:150626150626151477852Escherichia coli O26:H11 str. 11368 chromosome, complete genomepantoate--beta-alanine ligase6e-1685.1
NC_008253:149693:153370153370154221852Escherichia coli 536, complete genomepantoate-beta-alanine ligase6e-1685.1
NC_011745:149594:153922153922154773852Escherichia coli ED1a chromosome, complete genomepantoate--beta-alanine ligase6e-1685.1
NC_011740:165363:169917169917170768852Escherichia fergusonii ATCC 35469, complete genomepantothenate synthetase5e-1685.1
NC_011750:156799:158091158091158942852Escherichia coli IAI39 chromosome, complete genomepantoate--beta-alanine ligase5e-1685.1
NC_011742:149732:153964153964154815852Escherichia coli S88 chromosome, complete genomepantoate--beta-alanine ligase5e-1685.1
NS_000195:1257834:127121312712131272052840Candidatus Cloacamonas acidaminovoransPantoate--beta-alanine ligase (Pantothenate synthetase) (Pantoate activating enzyme)5e-1685.1
NC_008563:149709:153941153941154792852Escherichia coli APEC O1, complete genomepantoate-beta-alanine ligase7e-1684.7
NC_007946:149733:153965153965154816852Escherichia coli UTI89, complete genomePantoate-beta-alanine ligase7e-1684.7
NC_011601:149428:153744153744154595852Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomepantoate--beta-alanine ligase7e-1684.7
NC_013364:143492:149428149428150279852Escherichia coli O111:H- str. 11128, complete genomepantothenate synthetase7e-1684.7
CP002516:3949061:396180039618003962651852Escherichia coli KO11, complete genomepantoate/beta-alanine ligase9e-1684.3
CU928145:143755:147997147997148848852Escherichia coli 55989 chromosome, complete genomepantothenate synthetase9e-1684.3
NC_011748:143755:147997147997148848852Escherichia coli 55989, complete genomepantoate--beta-alanine ligase9e-1684.3
CP002185:146389:149252149252150103852Escherichia coli W, complete genomepantoate--beta-alanine ligase9e-1684.3
NC_009801:143426:149362149362150213852Escherichia coli E24377A, complete genomepantoate--beta-alanine ligase9e-1684.3
NC_010473:118681:122048122048122899852Escherichia coli str. K-12 substr. DH10B, complete genomepantothenate synthetase9e-1684.3
AP010958:143358:149294149294150145852Escherichia coli O103:H2 str. 12009 DNA, complete genomepantothenate synthetase9e-1684.3
CU928160:145276:148139148139148990852Escherichia coli IAI1 chromosome, complete genomepantothenate synthetase9e-1684.3
AC_000091:144577:147944147944148795852Escherichia coli W3110 DNA, complete genomepantothenate synthetase9e-1684.3
NC_000913:144577:147944147944148795852Escherichia coli K12, complete genomepantoate--beta-alanine ligase9e-1684.3
NC_005070:1898612:1924948192494819264531506Synechococcus sp. WH 8102, complete genomeputative bifunctional enzyme; pantothenate synthetase/cytidylate kinase8e-1684.3
NC_013961:2861949:288381328838132884667855Erwinia amylovora, complete genomepantothenate synthetase8e-1684.3
NC_016902:3949061:396180039618003962651852Escherichia coli KO11FL chromosome, complete genomepantoate--beta-alanine ligase9e-1684.3
NC_013353:143358:149294149294150145852Escherichia coli O103:H2 str. 12009, complete genomepantothenate synthetase9e-1684.3
NC_012759:144576:147943147943148794852Escherichia coli BW2952 chromosome, complete genomepantoate--beta-alanine ligase9e-1684.3
NC_011741:145276:148139148139148990852Escherichia coli IAI1 chromosome, complete genomepantoate--beta-alanine ligase9e-1684.3
NC_011415:146397:149260149260150111852Escherichia coli SE11 chromosome, complete genomepantoate--beta-alanine ligase9e-1684.3
NC_010468:3835259:385078838507883851639852Escherichia coli ATCC 8739, complete genomepantoate--beta-alanine ligase1e-1584
NC_012918:1444333:144519914451991446038840Geobacter sp. M21 chromosome, complete genomepantoate--beta-alanine ligase1e-1584
NC_012947:3619384:363212336321233632974852Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completepantoate--beta-alanine ligase1e-1584
NC_012967:145582:150747150747151598852Escherichia coli B str. REL606 chromosome, complete genomepantoate--beta-alanine ligase1e-1584
NC_015555:1989463:199028719902871991135849Thermoanaerobacterium xylanolyticum LX-11 chromosome, completePantothenate synthetase3e-1582.4
NC_007907:225948:227527227527228375849Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-1581.6
NC_008254:2728693:274918027491802750034855Mesorhizobium sp. BNC1, complete genomepantoate--beta-alanine ligase7e-1581.3
NC_004431:153907:158465158465159238774Escherichia coli CFT073, complete genomepantoate--beta-alanine ligase2e-1480.1
NC_013159:3858425:387325038732503874158909Saccharomonospora viridis DSM 43017, complete genomepantothenate synthetase2e-1480.1
NC_009142:6199326:6239847623984762419342088Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein with pantoate--beta-alanine ligase and Hydroxymethylglutaryl-coenzyme A reductase domains3e-1479.3
NC_016818:3986570:398822439882243989078855Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completepantoate--beta-alanine ligase1e-1377.4
NC_011206:1379068:140421614042161405052837Acidithiobacillus ferrooxidans ATCC 53993, complete genomepantoate/beta-alanine ligase3e-1376.3
NC_015167:1154497:117419911741991175044846Cellulophaga lytica DSM 7489 chromosome, complete genomePantothenate synthetase3e-1375.9
NC_019673:359540:365057365057365947891Saccharothrix espanaensis DSM 44229 complete genomePantoate-beta-alanine ligase6e-1375.1
NC_017047:4037674:404119540411954042049855Rahnella aquatilis HX2 chromosome, complete genomepantoate--beta-alanine ligase6e-1375.1
NC_017501:1493292:149530114953011496137837Neisseria meningitidis 8013, complete genomepantoate--beta-alanine ligase (pantothenate synthetase; pantoate activating enzyme)6e-1375.1
NC_003116:1018813:103696610369661037802837Neisseria meningitidis Z2491, complete genomepantoate--beta-alanine ligase9e-1374.3
NC_017512:789600:807859807859808695837Neisseria meningitidis WUE 2594, complete genomepantoate-beta-alanine ligase (pantothenate synthetase; pantoate activating enzyme)9e-1374.3
NC_007643:3799425:383005238300523830924873Rhodospirillum rubrum ATCC 11170, complete genomeCytidyltransferase-related8e-1374.3
NC_011769:3712497:371380137138013714652852Desulfovibrio vulgaris str. 'Miyazaki F', complete genomepantoate/beta-alanine ligase1e-1273.9
NC_008767:804655:821366821366822202837Neisseria meningitidis FAM18, complete genomeputative pantoate--beta-alanine ligase1e-1273.9
NC_017515:1402218:140221814022181403054837Neisseria meningitidis M04-240196 chromosome, complete genomepantoate--beta-alanine ligase1e-1273.6
NC_017517:898771:915484915484916320837Neisseria meningitidis M01-240355 chromosome, complete genomepantoate--beta-alanine ligase4e-1272
NC_007516:413159:4151284151284165701443Synechococcus sp. CC9605, complete genomepantoate-beta-alanine ligase8e-1271.2
NC_017516:1408000:140809214080921408853762Neisseria meningitidis H44/76 chromosome, complete genomepantoate--beta-alanine ligase2e-1170.1
NC_008278:6885254:692498869249886925872885Frankia alni ACN14a, complete genomePantoate-beta-alanine ligase (Pantothenate synthetase) (Pantoate activating enzyme)6e-1168.2
NC_015580:3779724:378067737806773781534858Novosphingobium sp. PP1Y, complete genomepantoate--beta-alanine ligase9e-1167.8
NC_007513:1807184:1829536182953618309871452Synechococcus sp. CC9902, complete genomeCytidylate kinase2e-1067
NC_015675:6276357:630849563084956309358864Mesorhizobium opportunistum WSM2075 chromosome, complete genomepantoate/beta-alanine ligase3e-1065.9
NC_019973:5650646:568278456827845683647864Mesorhizobium australicum WSM2073, complete genomepantoate--beta-alanine ligase3e-1065.9
NC_016830:4010637:401425340142534015113861Pseudomonas fluorescens F113 chromosome, complete genomePantoate--beta-alanine ligase4e-1065.5
NC_015953:3159234:317852031785203179497978Streptomyces sp. SirexAA-E chromosome, complete genomepantoate/beta-alanine ligase4e-0962.4
NC_014010:1489910:149249014924901493338849Candidatus Puniceispirillum marinum IMCC1322 chromosome, completepantoate-beta-alanine ligase7e-0858.2