Pre_GI Gene

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Host: NC_004431 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004431:1401681 Escherichia coli CFT073, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14014701401721252hypothetical proteinBLASTP
14016811402241561hypothetical proteinBLASTP
14022321402507276hypothetical proteinBLASTP
14024881402817330hypothetical proteinBLASTP
14028701403625756hypothetical proteinBLASTP
140362214051211500hypothetical proteinBLASTP
14052101405668459hypothetical proteinBLASTP
14059851406266282Unknown protein encoded within prophageQuickGO ontologyBLASTP
14064411406629189hypothetical proteinBLASTP
14066201407300681Putative exonuclease encoded by prophageQuickGO ontologyBLASTP
14066291406940312hypothetical protein
14072971408082786Putative recombination protein Bet of prophageQuickGO ontologyBLASTP
14080881408384297Putative host-nuclease inhibitor protein Gam of bacteriphageQuickGO ontologyBLASTP
14083531408505153hypothetical proteinBLASTP
14084601408603144hypothetical proteinBLASTP
14085721408736165Lambda Regulatory protein CIIIQuickGO ontologyBLASTP
14088091409177369Putative single-stranded DNA binding protein of prophageQuickGO ontologyBLASTP
14093601409560201Lambda ant-restriction proteinQuickGO ontologyBLASTP
14097741410355582Putative superinfection exclusion protein B of prophageQuickGO ontologyBLASTP
14110811411833753hypothetical proteinBLASTP
14118301412387558hypothetical proteinBLASTP
14124271412849423Repressor proteinQuickGO ontologyBLASTP
14130401413420381hypothetical proteinBLASTP
14135621413858297Putative Regulatory protein CII of bacteriophageQuickGO ontologyBLASTP
14138911414790900Putative replication protein O of bacteriophageQuickGO ontologyBLASTP
14147871415488702Putative replication protein P of bacteriophageQuickGO ontologyBLASTP
14154851415775291Putative exclusion protein ren of prophageQuickGO ontologyBLASTP
14158671416193327Unknown protein of IS629 encoded within prophageQuickGO ontologyBLASTP
14161901417080891Putative Transposase for IS629QuickGO ontologyBLASTP
14171621417602441Unknown protein encoded within prophageQuickGO ontologyBLASTP
14175691418126558Putative DNA N-6-adenine-methyltransferase of bacteriophageQuickGO ontologyBLASTP
14183021418643342hypothetical proteinBLASTP
14188501419212363Crossover junction endodeoxyribonuclease rusAQuickGO ontologyBLASTP
14192091419349141hypothetical proteinBLASTP
14194201419818399Antitermination protein Q homolog from lambdoid prophage DLP12QuickGO ontologyBLASTP
142000714211491143Outer membrane porin protein nmpC precursorQuickGO ontologyBLASTP