Pre_GI Gene

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Host: NC_003911 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003911:2540453 Silicibacter pomeroyi DSS-3, complete genome

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25404532541235783carbon monoxide dehydrogenase F proteinQuickGO ontologyBLASTP
254123225424131182carbon monoxide dehydrogenase E proteinQuickGO ontologyBLASTP
25424102543312903carbon monoxide dehydrogenase D proteinQuickGO ontologyBLASTP
254334425457732430carbon monoxide dehydrogenase large subunitQuickGO ontologyBLASTP
25457702546264495carbon monoxide dehydrogenase small subunitQuickGO ontologyBLASTP
25462782547132855carbon monoxide dehydrogenase medium subunitQuickGO ontologyBLASTP
254724425483651122carbon monoxide dehydrogenase operon C proteinQuickGO ontologyBLASTP
254886825521373270type I secretion target repeat proteinQuickGO ontologyBLASTP
25525072553294788BLASTP
25545892554693105hypothetical protein
25548172555454638BLASTP
25553722556031660site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
25567002557140441ISSpo6 transposase orf AQuickGO ontologyBLASTP
25570852557660576ISSpo6 transposase orfBQuickGO ontologyBLASTP
25592082559843636hypothetical proteinBLASTP
25606992561466768oxidoreductase short chain dehydrogenasereductase familyQuickGO ontologyBLASTP
256146325632441782dihydroxy-acid dehydrataseQuickGO ontologyBLASTP
25632672563821555hypothetical protein
25638432564538696aldolase putativeQuickGO ontologyBLASTP
25645482565300753oxidoreductase short chain dehydrogenasereductase familyQuickGO ontologyBLASTP
256544125666101170mandelate racemasemuconate lactonizing enzyme family proteinQuickGO ontologyBLASTP
25666072567521915phytanoyl-CoA dioxygenase family proteinQuickGO ontologyBLASTP