Pre_GI Gene

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Host: NC_003911 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003911:1791878 Silicibacter pomeroyi DSS-3, complete genome

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17918781792717840tRNA synthetase class I family proteinQuickGO ontologyBLASTP
179274617940951350glucose-inhibited division protein AQuickGO ontologyBLASTP
17944171795202786enoyl-CoA hydrataseQuickGO ontologyBLASTP
17952611795704444thioesterase family proteinQuickGO ontologyBLASTP
17957731796000228hypothetical protein
179610217975051404transcriptional regulator GntR familyQuickGO ontologyBLASTP
1797669179812745950S ribosomal protein L13QuickGO ontologyBLASTP
1798133179861548330S ribosomal protein S9QuickGO ontologyBLASTP
179914918007441596hypothetical proteinBLASTP
18021811803143963carbohydrate kinase pfkB familyQuickGO ontologyBLASTP
180422418063232100hydantoin utilization protein putativeQuickGO ontologyBLASTP
180632018079691650hydantoinaseoxoprolinase family proteinQuickGO ontologyBLASTP
180796618090481083aminotransferase classes I and IIQuickGO ontologyBLASTP
18090641809789726AspGluHydantoin racemase family proteinQuickGO ontologyBLASTP
180978618111321347MmgEPrpD family proteinQuickGO ontologyBLASTP
18111251812093969D-isomer specific 2-hydroxyacid dehydrogenase family proteinQuickGO ontologyBLASTP
18121041812997894dihydrodipicolinate synthase family proteinQuickGO ontologyBLASTP
181332018149631644hypothetical proteinBLASTP
181496818174482481CaiBBaiF family proteinQuickGO ontologyBLASTP
18175491818472924transcriptional regulator AraC familyQuickGO ontologyBLASTP
181911418205381425phage head morphogenesis domain protein SPP1 gp7 familyQuickGO ontologyBLASTP
18220821822984903BLASTP
18230981823793696branched-chain amino acid ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
18237971824537741branched-chain amino acid ABC transporter ATP-binding protein putativeQuickGO ontologyBLASTP
182453418257631230branched-chain amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
182576718277221956branched-chain amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
182778818291221335branched-chain amino acid ABC transporter periplasmic substrate-binding proteinQuickGO ontologyBLASTP
18295191830292774urease accessory protein UreDQuickGO ontologyBLASTP
18302941830596303urease gamma subunitQuickGO ontologyBLASTP
18307731831078306urease beta subunitQuickGO ontologyBLASTP
183107818327871710urease alpha subunitQuickGO ontologyBLASTP
18327991833248450urease accessory protein ureEQuickGO ontologyBLASTP
18332321833885654urease accessory protein UreFQuickGO ontologyBLASTP
18338821834529648urease accessory protein UreGQuickGO ontologyBLASTP
183469318358681176hypothetical proteinBLASTP
18376681837859192site-specific recombinase resolvase familyQuickGO ontologyBLASTP
183806918393461278TRAP dicarboxylate transporter DctM subunitQuickGO ontologyBLASTP
18393511839851501TRAP dicarboxylate transporter DctQ subunitQuickGO ontologyBLASTP
183992818409501023TRAP dicarboxylate transporter DctP subunit putativeQuickGO ontologyBLASTP
18409011841641741transcriptional regulator GntR familyQuickGO ontologyBLASTP
184174018429511212mannonate dehydrataseQuickGO ontologyBLASTP
184294818444321485D-mannonate oxidoreductaseQuickGO ontologyBLASTP
18450361845779744hypothetical proteinBLASTP
18458471846458612transcriptional regulator TetR familyQuickGO ontologyBLASTP
18464511847356906polyphosphate kinase 2 putativeQuickGO ontologyBLASTP
18473751848322948esterase putativeQuickGO ontologyBLASTP
18483291849267939homoserine O-succinyltransferaseQuickGO ontologyBLASTP
1849403184947775tRNA-GluQuickGO ontologyBLASTP
1849667184974175tRNA-GluQuickGO ontologyBLASTP
184985318515081656single-stranded-DNA-specific exonuclease RecJQuickGO ontologyBLASTP
18517011852654954fructose-16-bisphosphatase class IIQuickGO ontologyBLASTP