Pre_GI Gene

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Host: NC_003911 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003911:1749467 Silicibacter pomeroyi DSS-3, complete genome

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
174768917494701782oligopeptidedipeptide ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
17494671750342876oligopeptidedipeptide ABC transporter permease proteinQuickGO ontologyBLASTP
17503391751286948oligopeptidedipeptide ABC transporter permease proteinQuickGO ontologyBLASTP
175147917531371659oligopeptidedipeptide ABC transporter periplasmic substrate-binding proteinQuickGO ontologyBLASTP
175324317543461104aminomethyl transferase family proteinQuickGO ontologyBLASTP
175435417557151362invasion protein IbeAQuickGO ontologyBLASTP
17557181755828111hypothetical protein
17559681756324357hypothetical protein
17563581756930573transposase truncationQuickGO ontologyBLASTP
17585411759328788BLASTP
17600431761023981BLASTP
17611711761857687hypothetical protein
176189417641132220oligopeptidedipeptide ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
176411517653171203oligopeptidedipeptide ABC transporter permease proteinQuickGO ontologyBLASTP
176533217663781047oligopeptidedipeptide ABC transporter permease proteinQuickGO ontologyBLASTP
176652217683481827oligopeptidedipeptide ABC transporter periplasmic substrate-binding proteinQuickGO ontologyBLASTP
17684181769224807transcriptional regulator AraC familyQuickGO ontologyBLASTP
17692661770141876tRNA delta2-isopentenylpyrophosphate transferaseQuickGO ontologyBLASTP