Pre_GI Gene

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Host: NC_003911 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003911:1265972 Silicibacter pomeroyi DSS-3, complete genome

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
126597212675671596oligopeptide ABC transporter periplasmic oligopeptide-binding proteinQuickGO ontologyBLASTP
12676421268583942oligopeptide ABC transporter permease proteinQuickGO ontologyBLASTP
12685831269485903oligopeptide ABC transporter permease proteinQuickGO ontologyBLASTP
126946912711391671oligopeptide ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
127114312723121170hippurate hydrolaseQuickGO ontologyBLASTP
127231812734481131carboxypeptidaseQuickGO ontologyBLASTP
12743191275038720hypothetical proteinBLASTP
12751441275398255DNA-binding protein putativeQuickGO ontologyBLASTP
127727112788601590site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
127911112802381128site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
12803211280677357hypothetical protein
128067212826541983hypothetical protein
128350612849901485site-specific recombinase resolvase familyQuickGO ontologyBLASTP
12852461286073828hypothetical proteinBLASTP
128609212872551164hypothetical proteinBLASTP
12874091287987579hypothetical proteinBLASTP
128810912894551347lipoprotein putativeQuickGO ontologyBLASTP
12907251291075351hypothetical protein
12910621291544483hypothetical protein
12925171292876360hypothetical protein
129287612951822307hypothetical proteinBLASTP
12954311296327897hypothetical protein
12963491296696348DNA-binding protein H-NS familyQuickGO ontologyBLASTP
129712613005093384hypothetical proteinBLASTP
13008611301811951hypothetical proteinBLASTP
130204013038361797hypothetical proteinBLASTP
130393313052911359hypothetical proteinBLASTP
130553313068431311hypothetical proteinBLASTP
1307509130758274tRNA-CysQuickGO ontologyBLASTP
13077881308441654protein-L-isoaspartate O-methyltransferaseQuickGO ontologyBLASTP
130854013099581419type I secretion outer membrane protein TolC familyQuickGO ontologyBLASTP
13100341310963930hypothetical proteinBLASTP
131096413124211458cobyric acid synthaseQuickGO ontologyBLASTP
13126251313164540hypothetical proteinBLASTP
13131631313726564elongation factor PQuickGO ontologyBLASTP
13137981314730933ABC transporter permease proteinQuickGO ontologyBLASTP
13147591315493735aminomethyl transferase family proteinQuickGO ontologyBLASTP
13155731316253681glycosyl transferase group 2 family proteinQuickGO ontologyBLASTP
131631213175791268BLASTP
131757213199862415paraquat-inducible protein putativeQuickGO ontologyBLASTP