Pre_GI Gene

Some Help

Host: NC_003902 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003902:714478 Xanthomonas campestris pv. campestris str. ATCC 33913, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from cabbage. Causes black rot disease in crucifers. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7144787156171140type II secretion system protein-like proteinQuickGO ontologyBLASTP
715710716093384outer membrane proteinQuickGO ontologyBLASTP
716090716980891outer membrane proteinQuickGO ontologyBLASTP
717243717539297hypothetical proteinBLASTP
7177717191411371cystathionine beta-synthaseQuickGO ontologyBLASTP
7192357204341200cystathionine gamma-lyase-like proteinQuickGO ontologyBLASTP
7204317218161386glycosyltransferaseQuickGO ontologyBLASTP
721894722685792membrane subunit of LPS efflux transporterQuickGO ontologyBLASTP
7226827239681287ATP binding component of ABC-transporterQuickGO ontologyBLASTP
7240097263032295kinaseQuickGO ontologyBLASTP
7263387274171080glycosyltransferaseQuickGO ontologyBLASTP
7274387291801743membrane protein WxcDQuickGO ontologyBLASTP
729180729815636membrane protein WxcEQuickGO ontologyBLASTP
729897730841945GDP-mannose 46 dehydrataseQuickGO ontologyBLASTP
7309557321691215IS1481 transposaseQuickGO ontologyBLASTP
732274733212939UDP-glucose 4-epimeraseQuickGO ontologyBLASTP
733552733728177IS1479 transposaseQuickGO ontologyBLASTP
733928734695768ISxcC1 transposaseQuickGO ontologyBLASTP
734770735036267ISxcc1 transposaseQuickGO ontologyBLASTP
735327735449123ISxcd1 transposaseQuickGO ontologyBLASTP
7356257378172193hypothetical proteinBLASTP
737829738284456sugar translocaseQuickGO ontologyBLASTP
738265739194930bifunctional acetyl transferaseisomeraseQuickGO ontologyBLASTP
739191740162972glycosyltransferaseQuickGO ontologyBLASTP
7401477412501104aminotransferaseQuickGO ontologyBLASTP
741299741646348WxcH proteinQuickGO ontologyBLASTP
741706742650945electron transfer flavoprotein alpha subunitQuickGO ontologyBLASTP
742650743396747electron transfer flavoprotein beta subunitQuickGO ontologyBLASTP
7436257446801056dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
744741745631891glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
745628746185558dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
746182747090909dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
7472127486151404phosphomannose isomeraseGDP-mannose pyrophosphorylaseQuickGO ontologyBLASTP