Pre_GI Gene

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Host: NC_003902 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003902:1858349 Xanthomonas campestris pv. campestris str. ATCC 33913, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from cabbage. Causes black rot disease in crucifers. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
185834918595691221P-proteinQuickGO ontologyBLASTP
1859685186100113173-phosphoshikimate 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
18609851861581597TonB-like proteinQuickGO ontologyBLASTP
18616621862411750hypothetical proteinBLASTP
186242518637051281seryl-tRNA synthetaseQuickGO ontologyBLASTP
186398318650021020transcriptional regulatorQuickGO ontologyBLASTP
1865175186526490tRNA-SerQuickGO ontologyBLASTP
186542018668141395phage-related integraseQuickGO ontologyBLASTP
186690118681871287hydroxylaseQuickGO ontology
186895018709291980plasmid-related proteinQuickGO ontologyBLASTP
187143818726521215hypothetical proteinBLASTP
18728921873251360hypothetical proteinBLASTP
18732691873583315hypothetical proteinBLASTP
18736291874426798hypothetical proteinBLASTP
18745021874843342hypothetical proteinBLASTP
187495318760771125hypothetical proteinBLASTP
18763741876640267ISxcc1 transposaseQuickGO ontologyBLASTP
18767151877482768ISxcC1 transposaseQuickGO ontologyBLASTP
18780281878138111hypothetical protein
18786891879669981IS1479 transposaseQuickGO ontologyBLASTP
18805871880742156hypothetical proteinBLASTP
18808541881132279hypothetical proteinBLASTP
18813071882302996phage-related integraseQuickGO ontologyBLASTP
188232818837761449phage-related integraseQuickGO ontologyBLASTP
18841001884369270hypothetical proteinBLASTP
18843811885001621hypothetical proteinBLASTP
18854141886247834hypothetical proteinBLASTP
18862921886789498hypothetical proteinBLASTP
18871281887304177hypothetical proteinBLASTP
18877031888182480RadC family proteinQuickGO ontologyBLASTP
18881981888926729hypothetical proteinBLASTP
18889781889457480hypothetical proteinBLASTP
18895201889879360hypothetical proteinBLASTP
18900081890607600hypothetical proteinBLASTP
18914471892088642hypothetical proteinBLASTP
189212518961414017unknown acidic aa rich proteinQuickGO ontologyBLASTP
18961811896828648hypothetical proteinBLASTP
18977631898029267IS1477 transposaseQuickGO ontologyBLASTP
189784318988951053IS1477 transposaseQuickGO ontologyBLASTP
189956919006361068avirulence proteinQuickGO ontologyBLASTP
19006891901255567invertaserecombinase proteinQuickGO ontologyBLASTP
19013881901687300hypothetical proteinBLASTP
19016841902079396hypothetical proteinBLASTP
19023681903195828ISxac3 transposaseQuickGO ontologyBLASTP
19032401903518279ISxac3 transposaseQuickGO ontologyBLASTP
190355419066283075hypothetical proteinBLASTP
19069151907433519IS1480 transposaseQuickGO ontologyBLASTP
190831519105072193RhsD protein precursorQuickGO ontologyBLASTP
191061419119811368IS1478 transposaseQuickGO ontologyBLASTP
191197819142242247RhsD protein precursorQuickGO ontologyBLASTP
19142211914670450hypothetical proteinBLASTP
191460219158161215IS1481 transposaseQuickGO ontologyBLASTP