Pre_GI Gene

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Host: NC_002947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002947:8394 Pseudomonas putida KT2440, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
81568401246conserved hypothetical protein TIGR00278QuickGO ontologyBLASTP
83948798405ribonuclease PQuickGO ontologyBLASTP
8812894613550S ribosomal protein L34QuickGO ontologyBLASTP
9542110621521chromosomal replication initiation proteinQuickGO ontologyBLASTP
11103122061104DNA polymerase III subunit betaQuickGO ontologyBLASTP
12222133251104recombination protein FQuickGO ontologyBLASTP
13330157502421DNA gyrase subunit BQuickGO ontologyBLASTP
17133191662034transposase putativeQuickGO ontologyBLASTP
1916320122960GTP-binding protein putativeQuickGO ontologyBLASTP
20198221141917hypothetical proteinBLASTP
2217122530360transcriptional regulator MvaT P16 subunit putativeQuickGO ontologyBLASTP
2317624018843hypothetical proteinBLASTP
2400024698699hypothetical protein
2469525570876hypothetical proteinBLASTP
2588126804924hypothetical proteinBLASTP
2698927390402hypothetical proteinBLASTP
2759927727129hypothetical proteinBLASTP
27850295471698hypothetical proteinBLASTP
2999030142153hypothetical proteinBLASTP
3043131336906cobaltcadmiumzinc transporter CDF familyQuickGO ontologyBLASTP
3140431844441hypothetical proteinBLASTP
3187732203327hypothetical proteinBLASTP
3289333567675DNA-binding response regulator CzrRQuickGO ontologyBLASTP
33564349821419sensor histidine kinaseQuickGO ontologyBLASTP
3504035627588hypothetical proteinBLASTP
3589436115222hypothetical proteinBLASTP
36198376521455sugar transferase putativeQuickGO ontologyBLASTP
3764638629984glycosyl transferase group 2 family proteinQuickGO ontologyBLASTP
3859539014420GtrA family proteinQuickGO ontologyBLASTP
3927240240969transcriptional regulator putativeQuickGO ontologyBLASTP
40469417581290porin PQuickGO ontologyBLASTP
4177841912135hypothetical proteinBLASTP
42057430821026hypothetical proteinBLASTP
4321043434225hypothetical proteinBLASTP
43527455241998cadmium translocating P-type ATPaseQuickGO ontologyBLASTP
4572745939213hypothetical proteinBLASTP
46213493743162cobaltzinccadmium efflux RND transporter permease protein CzcA familyQuickGO ontologyBLASTP
49399506491251cobaltzinccadmium efflux RND transporter membrane fusion protein CzcB familyQuickGO ontologyBLASTP
50718519891272cobaltzinccadmium efflux RND transporter outer membrane protein CzcC familyQuickGO ontologyBLASTP
52394537371344porin putativeQuickGO ontologyBLASTP