Pre_GI: BLASTP Hits

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Query: NC_002947:8394:52394 Pseudomonas putida KT2440, complete genome

Start: 52394, End: 53737, Length: 1344

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:2548720:2598569259856925999121344Pseudomonas putida ND6 chromosome, complete genomeporin0881
NC_010322:29983:6515165151664941344Pseudomonas putida GB-1 chromosome, complete genomeouter membrane porin0881
NC_009512:27783:6436964369657121344Pseudomonas putida F1, complete genomeouter membrane porin0881
NC_010501:30000:6908569085704281344Pseudomonas putida W619, complete genomeouter membrane porin0881
NC_015733:5909821:5946188594618859475311344Pseudomonas putida S16 chromosome, complete genomeouter membrane porin0851
NC_009439:2427120:2449480244948024508021323Pseudomonas mendocina ymp, complete genomeouter membrane porin5e-170597
NC_009439:1297851:1318463131846313198031341Pseudomonas mendocina ymp, complete genomeouter membrane porin2e-163575
NC_009434:3611738:3695568369556836968871320Pseudomonas stutzeri A1501, complete genomeouter membrane porin7e-161567
NC_015740:1291739:1301977130197713032961320Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeouter membrane porin7e-161567
NC_002516:1031386:1043983104398310453141332Pseudomonas aeruginosa PAO1, complete genomeBasic amino acid, basic peptide and imipenem outer membrane porin OprD precursor2e-83309
NC_015556:1188500:1198293119829311995401248Pseudomonas fulva 12-X chromosome, complete genomeouter membrane porin5e-72271
NC_002516:2306776:2323554232355423247831230Pseudomonas aeruginosa PAO1, complete genomeprobable porin2e-61236
NC_010501:5442000:5457529545752954588481320Pseudomonas putida W619, complete genomeouter membrane porin2e-58226
NC_007492:2994036:3012598301259830138991302Pseudomonas fluorescens PfO-1, complete genomeouter membrane porin6e-58225
NC_012560:4929683:4951297495129749525651269Azotobacter vinelandii DJ, complete genomeBacterial outer membrane porin1e-57224
NC_021150:4929670:4951284495128449525521269Azotobacter vinelandii CA6, complete genomeouter membrane porin1e-57224
NC_009434:3434381:3462841346284134641151275Pseudomonas stutzeri A1501, complete genomeporin2e-57223
NC_009512:5920960:5928954592895459301951242Pseudomonas putida F1, complete genomeouter membrane porin7e-57221
NC_012660:1579204:1598386159838615996781293Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein7e-57221
NC_015740:3486226:3490394349039434916561263Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-55216
NC_017986:5833819:5859445585944558606831239Pseudomonas putida ND6 chromosome, complete genomeouter membrane porin2e-54213
NC_004129:1014986:1019646101964610210521407Pseudomonas fluorescens Pf-5, complete genomeouter membrane porin, OprD family1e-53210
NC_004129:5723787:5753548575354857548671320Pseudomonas fluorescens Pf-5, complete genomeporin D3e-53209
NC_015410:3003417:3011502301150230126981197Pseudomonas mendocina NK-01 chromosome, complete genomeporin2e-53209
NC_002947:4293252:4294069429406942953701302Pseudomonas putida KT2440, complete genomeporin, putative2e-52207
NC_010501:4989455:4996865499686549981391275Pseudomonas putida W619, complete genomeouter membrane porin2e-52207
NC_009512:2238437:2259992225999222612811290Pseudomonas putida F1, complete genomeouter membrane porin5e-52205
NC_010501:3448389:3457520345752034587941275Pseudomonas putida W619, complete genomeouter membrane porin5e-52205
NC_009439:4734237:4747711474771147490301320Pseudomonas mendocina ymp, complete genomeouter membrane porin7e-52204
NC_007005:5825925:5842863584286358441371275Pseudomonas syringae pv. syringae B728a, complete genomeouter membrane porin2e-51203
NC_004578:6089958:6121092612109261223661275Pseudomonas syringae pv. tomato str. DC3000, complete genomeouter membrane porin, OprD family3e-51202
NC_005773:176885:1828831828831841571275Pseudomonas syringae pv. phaseolicola 1448A, complete genomeouter membrane porin, OprD family3e-50199
NC_012660:3320330:3339051333905133403041254Pseudomonas fluorescens SBW25 chromosome, complete genomeputative exported family S43 non-peptidase homologue7e-50198
NC_021150:1677811:1697174169717416983911218Azotobacter vinelandii CA6, complete genomeouter membrane porin9e-50197
NC_012560:1677798:1697161169716116983781218Azotobacter vinelandii DJ, complete genomeBacterial outer membrane porin9e-50197
NC_020209:5077410:5080673508067350819741302Pseudomonas poae RE*1-1-14, complete genomeouter membrane protein, oprE32e-47190
NC_017986:2548720:2572480257248025737061227Pseudomonas putida ND6 chromosome, complete genomeouter membrane porin7e-47188
NC_009439:1297851:1314978131497813163061329Pseudomonas mendocina ymp, complete genomeouter membrane porin1e-44181
NC_016830:6499234:6514151651415165154701320Pseudomonas fluorescens F113 chromosome, complete genomeprotein OprD2e-43177
NC_009512:1518113:1531521153152115327471227Pseudomonas putida F1, complete genomeouter membrane porin2e-40166
NC_012560:3200961:3222480322248032237991320Azotobacter vinelandii DJ, complete genomeOprE-like outer membrane porin2e-39164
NC_021150:3200959:3222478322247832237971320Azotobacter vinelandii CA6, complete genomeOprE-like outer membrane porin2e-39164
NC_012560:5019900:5021653502165350229781326Azotobacter vinelandii DJ, complete genomeOprE-like outer membrane porin1e-39164
NC_021150:5019887:5021640502164050229651326Azotobacter vinelandii CA6, complete genomeOprE-like outer membrane porin1e-39164
NC_010501:3671517:3682477368247736837901314Pseudomonas putida W619, complete genomeouter membrane porin2e-28127
NC_010611:240839:2467232467232481321410Acinetobacter baumannii ACICU, complete genomeputative outer membrane protein1e-27124