Pre_GI Gene

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Host: NC_001264 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_001264:28266 Deinococcus radiodurans R1 chromosome 2, complete sequence

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28266297441479hypothetical proteinBLASTP
2974830266519hypothetical protein
302953165913654-aminobutyrate aminotransferaseQuickGO ontologyBLASTP
317383331815811-pyrroline-5-carboxylate dehydrogenase putativeQuickGO ontologyBLASTP
33474345591086glucose-1-phosphate thymidylyltransferase putativeQuickGO ontologyBLASTP
34788359061119mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
35903375731671ExoP-related proteinQuickGO ontologyBLASTP
37578390231446UDP-galactose-lipid carrier transferaseQuickGO ontologyBLASTP
39026402881263O-antigen transporter RfbX putativeQuickGO ontologyBLASTP
40439416561218hypothetical protein
4164342629987glycosyltransferaseQuickGO ontologyBLASTP
4263243447816rhamnosyltransferase putativeQuickGO ontologyBLASTP
43517445481032mannosyltransferaseQuickGO ontologyBLASTP
44545456481104first mannosyl transferaseQuickGO ontologyBLASTP
45652467461095thymidine diphosphoglucose 46-dehydrataseQuickGO ontologyBLASTP
4674347633891glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
4762648174549lipopolysaccharide biosynthesis protein putativeQuickGO ontologyBLASTP
4817148914744dTDP-4-rhamnose reductase-related proteinQuickGO ontologyBLASTP
4891849838921hypothetical protein
49835509891155hypothetical proteinBLASTP
51064524851422phospho-sugar mutase putativeQuickGO ontologyBLASTP
5250753430924mannose-6-phosphate isomerase putativeQuickGO ontologyBLASTP
5346653915450response regulatorQuickGO ontologyBLASTP
53908561752268photoreceptorQuickGO ontologyBLASTP
5617256767596Heme oxygenaseQuickGO ontology
56791581761386acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
58122595161395succinyl-CoA3-ketoacid-CoA transferase putativeQuickGO ontologyBLASTP
5950360405903ribokinaseQuickGO ontologyBLASTP