Pre_GI: BLASTP Hits

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Query: NC_001264:28266:49835 Deinococcus radiodurans R1 chromosome 2, complete sequence

Start: 49835, End: 50989, Length: 1155

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008025:316302:3539683539683551671200Deinococcus geothermalis DSM 11300, complete genomeO-antigen polymerase2e-106385
NC_014958:3131191:3153874315387431554271554Deinococcus maricopensis DSM 21211 chromosome, complete genomeO-antigen polymerase1e-23110
NC_014974:246404:2464042464042478431440Thermus scotoductus SA-01 chromosome, complete genomeO-antigen polymerase family4e-1376.3
NC_012526:2431388:2435309243530924368411533Deinococcus deserti VCD115, complete genomeputative O-Antigen polymerase; putative membrane protein4e-1272.8