Pre_GI Gene

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Host: NC_000962 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000962:475816 Mycobacterium tuberculosis H37Rv, complete genome

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain has been derived from the original human-lung H37 isolate in 1934, and has been used extensively worldwide in biomedical research. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
475816476184369CONSERVED 13E12 REPEAT FAMILY PROTEINQuickGO ontologyBLASTP
476679477320642POSSIBLE SECRETED PROTEINQuickGO ontologyBLASTP
4773274785561230POSSIBLE CONSERVED LIPOPROTEIN LPQKQuickGO ontologyBLASTP
4785664797531188ACYL-CoA DEHYDROGENASE FADE7QuickGO ontologyBLASTP
479789480160372PROBABLE CONSERVED TRANSMEMBRANE PROTEINQuickGO ontologyBLASTP
4803554832312877PROBABLE CONSERVED TRANSMEMBRANE TRANSPORT PROTEIN MMPL1QuickGO ontologyBLASTP
483228483656429PROBABLE CONSERVED MEMBRANE PROTEIN MMPS1QuickGO ontologyBLASTP
4839774857341758acyl-CoA synthaseQuickGO ontologyBLASTP
4857314899394209PROBABLE MEMBRANE BOUND POLYKETIDE SYNTHASE PKS6QuickGO ontologyBLASTP
489887490705819BETA LACTAMASE LIKE PROTEINQuickGO ontologyBLASTP
4907834917931011PROBABLE F420-DEPENDENT GLUCOSE-6-PHOSPHATE DEHYDROGENASE FGD1QuickGO ontologyBLASTP
4917864938582073phosphate acetyltransferaseQuickGO ontologyBLASTP
4938514950081158acetatepropionate kinaseQuickGO ontologyBLASTP
4950624973142253SERINETHREONINE-PROTEIN KINASE PKNG PROTEIN KINASE G STPK GQuickGO ontologyBLASTP
497314498300987PROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH GLNBPQuickGO ontologyBLASTP
4983004996191320POSSIBLE CONSERVED MEMBRANE PROTEINQuickGO ontologyBLASTP