Pre_GI Gene

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Host: NC_000962 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000962:3288464 Mycobacterium tuberculosis H37Rv, complete genome

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain has been derived from the original human-lung H37 isolate in 1934, and has been used extensively worldwide in biomedical research. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
328846432897051242IS1533 transposaseQuickGO ontologyBLASTP
32897053290235531POSSIBLE TRANSPOSASEQuickGO ontologyBLASTP
32897903290506717IS1533 transposaseQuickGO ontologyBLASTP
32906243291325702PROBABLE CONSERVED LIPOPROTEIN LPPXQuickGO ontologyBLASTP
329150332963534851PROBABLE POLYKETIDE SYNTHASE PKS1QuickGO ontologyBLASTP
329635032978401491PROBABLE POLYKETIDE SYNTHASE PKS15QuickGO ontologyBLASTP
329783732999542118acyl-CoA synthaseQuickGO ontologyBLASTP
32999713300570600hypothetical proteinBLASTP
330059633024551860acyl-CoA synthaseQuickGO ontologyBLASTP
330310333042481146POSSIBLE OXIDOREDUCTASEQuickGO ontologyBLASTP
33044413305253813POSSIBLE METHYLTRANSFERASE METHYLASEQuickGO ontologyBLASTP
330527933065351257hypothetical proteinBLASTP
33066663307391726hypothetical proteinBLASTP
33075803308545966hypothetical proteinBLASTP
33086683309399732hypothetical proteinBLASTP
33094703310297828POSSIBLE GLYCOSYL TRANSFERASEQuickGO ontologyBLASTP