Pre_GI: BLASTP Hits

Some Help

Query: NC_020134:2193900:2201038 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2201038, End: 2201322, Length: 285

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:3205333:320780532078053208083279Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein2e-29127
NC_020291:1389114:141027314102731410545273Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein UPF02962e-28124
NC_009012:1595498:159934315993431599624282Clostridium thermocellum ATCC 27405, complete genomeprotein of unknown function DUF3702e-28124
NC_019970:1457794:146255814625581462842285Thermoanaerobacterium thermosaccharolyticum M0795, complete genomehypothetical protein5e-28122
NC_002570:2616899:263282826328282633091264Bacillus halodurans C-125, complete genomehypothetical protein2e-26117
NC_014657:914071:938907938907939218312Caldicellulosiruptor owensensis OL chromosome, complete genomehypothetical protein4e-25113
NC_021171:1354000:137433713743371374600264Bacillus sp. 1NLA3E, complete genomehypothetical protein5e-25112
NC_007775:2702045:271174527117452712014270Synechococcus sp. JA-3-3Ab, complete genomehypothetical protein3e-22103
NC_017138:980696:100289210028921003152261Bacillus megaterium WSH-002 chromosome, complete genomehypothetical protein4e-2199.8
NC_015873:1933036:193652219365221936821300Megasphaera elsdenii DSM 20460, complete genomeUPF0296 protein HMPREF0889_16204e-1993.6
NC_009616:99647:103577103577103861285Thermosipho melanesiensis BI429 chromosome, complete genomehypothetical protein8e-1992.4
NC_011653:331986:337148337148337432285Thermosipho africanus TCF52B, complete genomehypothetical protein8e-1992.4
NC_012785:1960500:198047819804781980777300Kosmotoga olearia TBF 19.5.1, complete genomeprotein of unknown function DUF3709e-1992
NC_016751:1623756:162668516266851626978294Marinitoga piezophila KA3 chromosome, complete genomehypothetical protein2e-1787.4
NC_016148:1175999:118369111836911183951261Thermovirga lienii DSM 17291 chromosome, complete genomehypothetical protein1e-1685.1
NC_014314:69872:830768307683363288Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein4e-1580.1
NC_013223:343344:364827364827365093267Desulfohalobium retbaense DSM 5692, complete genomeprotein of unknown function DUF3702e-1477.8
NC_013517:3082279:308708530870853087324240Sebaldella termitidis ATCC 33386, complete genomeprotein of unknown function DUF3703e-1477.4
NC_012796:3600630:368390736839073684167261Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-1374.7
NC_015519:1081539:109188510918851092130246Tepidanaerobacter sp. Re1 chromosome, complete genomehypothetical protein2e-0857.8