Pre_GI: BLASTP Hits

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Query: NC_020134:1173000:1187410 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1187410, End: 1187826, Length: 417

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016633:2239413:224596422459642246335372Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative stress-responsive transcriptional regulator8e-1269.3
NC_016633:2239413:225076422507642251129366Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative stress-responsive transcriptional regulator1e-1168.9
NC_014209:1392115:140913014091301409315186Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,phage shock protein C, PspC8e-0855.8
NC_014160:869873:872950872950873429480Thermosphaera aggregans DSM 11486 chromosome, complete genomephage shock protein C9e-0855.5
NC_007929:111092:124856124856125086231Lactobacillus salivarius subsp. salivarius UCC118, complete genomeStress-responsive transcriptional regulator PspC1e-0755.1
NC_014829:3822125:382579638257963825993198Bacillus cellulosilyticus DSM 2522 chromosome, complete genomephage shock protein C, PspC2e-0754.7
NC_013192:1824174:182594418259441826135192Leptotrichia buccalis DSM 1135, complete genomephage shock protein C, PspC2e-0754.3
NC_007333:3360000:336000733600073360267261Thermobifida fusca YX, complete genomesimilar to Putative stress-responsive transcriptional regulator9e-0752.4
NC_007907:4692336:470982647098264710284459Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-0752.4
NC_009637:602079:625701625701625961261Methanococcus maripaludis C7 chromosome, complete genomephage shock protein C, PspC2e-0651.2