Pre_GI: BLASTP Hits

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Query: NC_017270:2500815:2510329 Vibrio cholerae LMA3984-4 chromosome chromosome I, complete

Start: 2510329, End: 2510401, Length: 73

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013457:979102:98795998795998803476Vibrio sp. Ex25 chromosome 2, complete genometRNA-Val5e-0649.7
NC_010376:186510:20363020363020370576Finegoldia magna ATCC 29328, complete genometRNA-Val5e-0649.7
NC_010376:606000:61738861738861746376Finegoldia magna ATCC 29328, complete genometRNA-Val5e-0649.7
NC_019978:1816940:18262481826248182632376Halobacteroides halobius DSM 5150, complete genometRNA-Val9e-0648.9
NC_014654:2180994:21884702188470218854576Halanaerobium sp. 'sapolanicus' chromosome, complete genometRNA-Val9e-0648.9
NC_019978:7535:20664206642073976Halobacteroides halobius DSM 5150, complete genometRNA-Val9e-0648.9
NC_014378:131810:14316814316814324376Acetohalobium arabaticum DSM 5501 chromosome, complete genometRNA-Val9e-0648.9