Pre_GI: BLASTP Hits

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Query: NC_016945:666000:686852 Vibrio cholerae IEC224 chromosome II, complete sequence

Start: 686852, End: 687172, Length: 321

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016628:373815:379973379973380290318Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein6e-36149
NC_015663:4950000:495147549514754951798324Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-28123
NC_009436:2776410:278029427802942780629336Enterobacter sp. 638, complete genomehypothetical protein5e-28122
NC_011740:2072173:207729420772942077629336Escherichia fergusonii ATCC 35469, complete genomehypothetical protein1e-27121
NC_013508:1289159:131809513180951318472378Edwardsiella tarda EIB202, complete genomehypothetical protein8e-25112
NC_012779:1286500:131368913136891314021333Edwardsiella ictaluri 93-146, complete genomehypothetical protein8e-25112