Pre_GI: BLASTP Hits

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Query: NC_016830:2247789:2276937 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 2276937, End: 2277647, Length: 711

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4790482:482969948296994830202504Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-33142
NC_019940:389979:396690396690397370681Thioflavicoccus mobilis 8321 chromosome, complete genomeFRG domain-containing protein4e-1478.6
NC_013235:464049:473974473974474771798Nakamurella multipartita DSM 44233, complete genomeFRG domain protein8e-1064.3
NC_010334:2615260:264593626459362646739804Shewanella halifaxensis HAW-EB4, complete genomeFRG domain protein1e-0963.5
NC_009719:336000:355784355784356458675Parvibaculum lavamentivorans DS-1 chromosome, complete genomeFRG domain-containing protein2e-0962.8
NC_009483:1636189:164726516472651648098834Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein2e-0859.3
NC_007492:2771021:278356727835672784469903Pseudomonas fluorescens PfO-1, complete genomehypothetical protein6e-0857.8
NC_020387:796253:807292807292808086795Dehalococcoides mccartyi BTF08, complete genomeFRG domain-containing protein1e-0757
NC_014973:3452100:346368534636853464350666Geobacter sp. M18 chromosome, complete genomeFRG domain-containing protein5e-0754.7
NC_014366:2427968:243695624369562437705750Gamma proteobacterium HdN1, complete genomehypothetical protein7e-0754.3