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Query: NC_015761:1017301:1024945 Salmonella bongori NCTC 12419, complete genome

Start: 1024945, End: 1025226, Length: 282

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016612:3314846:333562633356263335904279Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-36151
NC_012731:2083650:211135621113562111634279Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-36150
NC_013850:2182337:220926422092642209545282Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF7541e-33141
NC_009648:1541699:156508615650861565367282Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-33140
NC_015663:4522109:452777945277794528060282Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-33140
NC_014121:1682638:169597416959741696252279Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative prophage membrane protein1e-28124
NC_020181:5217000:522838352283835228562180Enterobacter aerogenes EA1509E, complete genomePutative prophage membrane protein7e-22102
NC_013282:1804909:182466118246611824945285Cronobacter turicensis, complete genomehypothetical protein4e-1993.6
NC_011294:1465500:148045714804571480744288Salmonella enterica subsp. enterica serovar Enteritidis strprophage membrane protein9e-1889
NC_016612:4119410:412685341268534127125273Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-1685.5
NC_017047:1906000:191801619180161918303288Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein7e-1682.8
NC_016902:2580774:258606925860692586344276Escherichia coli KO11FL chromosome, complete genomehypothetical protein4e-1580.1
CP002516:2580774:258606925860692586344276Escherichia coli KO11, complete genomeprotein of unknown function DUF7544e-1580.1
NC_010694:2189652:219575321957532196022270Erwinia tasmaniensis, complete genomePutative prophage membrane protein4e-1580.1
NC_014562:983398:100270610027061003020315Pantoea vagans C9-1 chromosome, complete genomeputative prophage membrane protein2e-1167.8