Pre_GI: BLASTP Hits

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Query: NC_015410:3209954:3210883 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 3210883, End: 3212043, Length: 1161

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008757:77023:7702377023783961374Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeTrbL/VirB6 plasmid conjugal transfer protein4e-102371
NC_008577:1489643:1498780149878015001621383Shewanella sp. ANA-3 chromosome 1, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein4e-99361
NC_010002:2933909:2962051296205129634031353Delftia acidovorans SPH-1, complete genomeP-type conjugative transfer protein TrbL2e-98359
NC_011992:1381843:1381843138184313832221380Acidovorax ebreus TPSY, complete genomeP-type conjugative transfer protein TrbL5e-97354
NC_018691:3082000:3103448310344831047941347Alcanivorax dieselolei B5 chromosome, complete genomeTrbG-like protein1e-96353
NC_009656:3817261:3835607383560738369921386Pseudomonas aeruginosa PA7 chromosome, complete genomeconjugal transfer protein TrbL1e-96353
NC_015422:1643000:1660586166058616619711386Alicycliphilus denitrificans K601 chromosome, complete genomeP-type conjugative transfer protein TrbL2e-95349
NC_015381:2859000:2874920287492028762961377Burkholderia gladioli BSR3 chromosome 1, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein3e-95348
NC_012912:1295653:1314635131463513157981164Dickeya zeae Ech1591, complete genomeP-type conjugative transfer protein TrbL8e-91334
NC_014500:894136:8973328973328984981167Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbL5e-91334
NC_010170:4800000:4884272488427248855341263Bordetella petrii, complete genomeconjugal transfer protein TrbL2e-80299
NC_007925:3911323:3928294392829439295891296Rhodopseudomonas palustris BisB18, complete genomeTrbL/VirB6 plasmid conjugal transfer protein3e-77289
NC_014834:3472000:3501501350150135027421242Rhodopseudomonas palustris DX-1 chromosome, complete genomeP-type conjugative transfer protein TrbL2e-75283
NC_008686:1439328:1439328143932814406801353Paracoccus denitrificans PD1222 chromosome 1, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein2e-75283
NC_010338:4148667:4152296415229641536601365Caulobacter sp. K31, complete genomeP-type conjugative transfer protein TrbL2e-75282
NC_009720:4406991:4422856442285644241451290Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbL1e-74280
NC_009937:4392108:4415454441545444166831230Azorhizobium caulinodans ORS 571, complete genomeconjugal transfer protein1e-74280
NC_009720:750612:7828687828687842231356Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbL2e-74279
NC_009485:8138314:8138314813831481396631350Bradyrhizobium sp. BTAi1 chromosome, complete genomeconjugal transfer protein TrbL2e-74279
NC_014834:614890:6184246184246196471224Rhodopseudomonas palustris DX-1 chromosome, complete genomeP-type conjugative transfer protein TrbL6e-74278
NC_009720:670853:6742806742806755031224Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbL6e-74278
NC_009668:529175:5387475387475401051359Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceconjugal transfer protein TrbL1e-73277
NC_009720:813157:8302868302868316381353Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbL1e-73276
NC_015593:2914384:2914384291438429157121329Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeP-type conjugative transfer protein TrbL3e-73275
NC_014834:959986:9811959811959825471353Rhodopseudomonas palustris DX-1 chromosome, complete genomeP-type conjugative transfer protein TrbL1e-72273
NC_010125:1011430:1028418102841810296771260Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein; TrbL1e-72273
NC_010725:3315007:3316153331615333175051353Methylobacterium populi BJ001, complete genomeP-type conjugative transfer protein TrbL5e-72271
NC_008254:534590:5570655570655584141350Mesorhizobium sp. BNC1, complete genomeTrbL/VirB6 plasmid conjugal transfer protein5e-72271
NC_014006:2932959:2954722295472229560171296Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TrbL3e-71269
NC_009720:3317642:3336186333618633375411356Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein TrbL1e-70267
NC_015186:491930:4919304919304932281299Acidiphilium multivorum AIU301, complete genomeP-type conjugative transfer protein TrbL2e-58226
NC_015186:2839668:2858243285824328595921350Acidiphilium multivorum AIU301, complete genomeputative conjugal transfer protein TrbL7e-58224
NC_010125:2813653:283333128333312834020690Gluconacetobacter diazotrophicus PAl 5, complete genome1e-51204
NC_017249:2109843:211433121143312115170840Bradyrhizobium japonicum USDA 6, complete genomeconjugal transfer protein5e-36152
NC_004463:1772541:177398917739891774828840Bradyrhizobium japonicum USDA 110, complete genomeconjugal transfer protein5e-36152
NC_017068:1401352:1401352140135214030671716Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative conjugal transfer protein TrbL4e-1169.7
NC_015437:697051:7291267291267302291104Selenomonas sputigena ATCC 35185 chromosome, complete genomeP-type conjugative transfer protein TrbL2e-1067