Pre_GI: BLASTP Hits

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Query: NC_014169:2234249:2245799 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 2245799, End: 2246704, Length: 906

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015500:311845:331391331391332227837Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein1e-35150
NC_002678:763808:7813347813347833522019Mesorhizobium loti MAFF303099, complete genomeprobable glycosyltransferase1e-25117
NC_018607:1313035:1330166133016613322532088Brachyspira pilosicoli B2904 chromosome, complete genomeputative glycosyltransferase6e-25115
NC_014100:533322:546279546279547190912Caulobacter segnis ATCC 21756 chromosome, complete genomeglycosyltransferase2e-24113
NC_015593:2103815:211970921197092120578870Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeglycosyltransferase9e-23107
NC_014836:312353:323713323713324534822Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein1e-22107
NC_014484:1690272:170624117062411707128888Spirochaeta thermophila DSM 6192 chromosome, complete genomeputative glycosyltransferase2e-22107
NC_018679:4028412:4039690403969040416391950Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeZn-dependent alcohol dehydrogenase, class III9e-22104
NC_007298:2568851:260747126074712608334864Dechloromonas aromatica RCB, complete genomehypothetical protein5e-1788.6
NC_018581:1180951:119505111950511195962912Gordonia sp. KTR9 chromosome, complete genomeFucose 4-O-acetylase-related acetyltransferase2e-1686.3
NC_012522:5987644:600102660010266001913888Rhodococcus opacus B4, complete genomehypothetical protein5e-1478.6
NC_002678:3701500:3713486371348637152161731Mesorhizobium loti MAFF303099, complete genomeglycosyltransferase, contains similarity to NolL1e-1273.6
NC_021150:201237:209581209581210345765Azotobacter vinelandii CA6, complete genomehypothetical protein4e-1065.9
NC_012560:201237:209581209581210345765Azotobacter vinelandii DJ, complete genomehypothetical protein4e-1065.9
NC_010475:1582856:159714315971431598054912Synechococcus sp. PCC 7002, complete genomehypothetical protein7e-1065.1