Pre_GI: BLASTN Hits

Some Help

Query: NC_013891:2643085 Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome

Start: 2643085, End: 2666099, Length: 23015

Host Lineage: Listeria seeligeri; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria are Gram-positive, motile, facultative anaerobic bacteria; L.seeligeri is one of the nonpathogenic members of the genus. Strain LSCC 3954, the type strain for this species, is a soil isolate from Germany. A contaminant of soft cheese, processed meat, and smoked seafood. More than 100 strains of this organism have been isolated from environmental samples and healthy animal carriers. This species can be distinguished from other Listeria by its ability to produce acid from D-xylose, L-rhamnose, and alpha-methyl-D-mannoside.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003212:28373662837366286009922734Listeria innocua Clip11262, complete genome09192BLASTN svgBLASTP svg
NC_002973:27019832701983272478722805Listeria monocytogenes str. 4b F2365, complete genome08427BLASTN svgBLASTP svg
NC_003210:27495382749538277261223075Listeria monocytogenes EGD-e, complete genome07719BLASTN svgBLASTP svg
NC_011146:3720658*3720658375266832011Geobacter bemidjiensis Bem, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_012968:15949541594954163297838025Methylotenera mobilis JLW8, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006270:14150011415001145819443194Bacillus licheniformis ATCC 14580, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006322:14158631415863145905643194Bacillus licheniformis ATCC 14580, complete genome7e-0763.9BLASTN svgBLASTP svg