Pre_GI: BLASTP Hits

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Query: NC_013410:3105121:3122266 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3122266, End: 3124656, Length: 2391

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011027:1488455:1488455148845514910762622Chlorobaculum parvum NCIB 8327, complete genomehypothetical protein3e-32140
NC_015144:1526669:1528041152804115306892649Weeksella virosa DSM 16922 chromosome, complete genomehypothetical protein2e-22108
NC_019978:2396000:2409199240919924111091911Halobacteroides halobius DSM 5150, complete genomeorganic solvent tolerance protein OstA2e-0758.9
NC_009662:1329788:1345795134579513478672073Nitratiruptor sp. SB155-2, complete genomeorganic solvent tolerance protein1e-0656.2
NC_015731:2148517:2168411216841121706452235Nitrosomonas sp. Is79A3 chromosome, complete genomeLPS-assembly protein lptD1e-0655.5