Pre_GI: BLASTP Hits

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Query: NC_013316:2033906:2052125 Clostridium difficile R20291, complete genome

Start: 2052125, End: 2052538, Length: 414

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014828:541874:554644554644555048405Ethanoligenens harbinense YUAN-3 chromosome, complete genomerna polymerase, sigma-24 subunit, ecf subfamily (ecf subfamily rna polymerase sigma-70 factor)9e-42168
NC_016048:2907702:295520529552052955855651Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein7e-41165