Pre_GI: BLASTP Hits

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Query: NC_012668:368305:404385 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 404385, End: 405314, Length: 930

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008740:876115:8852878852878863181032Marinobacter aquaeolei VT8, complete genomeWavE lipopolysaccharide synthesis4e-44178
NC_005773:5310339:5311755531175553127981044Pseudomonas syringae pv. phaseolicola 1448A, complete genomeWavE lipopolysaccharide synthesis superfamily2e-1893.2
NC_015677:896673:9148979148979159461050Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein3e-1892.4
NC_017033:3013654:3033919303391930350041086Frateuria aurantia DSM 6220 chromosome, complete genomeWavE lipopolysaccharide synthesis3e-0962.8
NC_008321:4631866:464359646435964644486891Shewanella sp. MR-4, complete genomehypothetical protein5e-0962
NC_008577:4907497:491923049192304920120891Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein5e-0962
NC_017033:3013654:3025458302545830266421185Frateuria aurantia DSM 6220 chromosome, complete genomeWavE lipopolysaccharide synthesis5e-0755.5
NC_018145:50237:5577955779568671089Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completehypothetical protein1e-0653.9
NC_006526:1303635:1316403131640313174911089Zymomonas mobilis subsp. mobilis ZM4, complete genomehypothetical protein5e-0652