Pre_GI: BLASTP Hits

Some Help

Query: NC_012668:160357:163631 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 163631, End: 164014, Length: 384

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008570:4009762:401717240171724017534363Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical membrane protein2e-35147
NC_015424:748785:763980763980764345366Aeromonas veronii B565 chromosome, complete genomehypothetical protein5e-34142
NC_009348:3819271:382598638259863826348363Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein6e-34142
NC_015410:2698572:270392427039242704232309Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein4e-1580.1
NC_008463:1912348:194403619440361944257222Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein6e-1372.8
NC_014541:475350:524355524355524570216Ferrimonas balearica DSM 9799 chromosome, complete genomeProtein of unknown function DUF2061, membrane1e-1271.6